RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 SMIM12Q96EX1 92 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 TREM1Q9NP99 234 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 C9JCJ5 164 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 F6UB75 175 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 H3BMM0 161 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 DEFB1P60022 68 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 UBE2G1P62253 170 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 FLI1Q01543 452 aaPredicted RBP9.88□□□□□ -0.83
TRAIP-210ENST00000489948 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
TRAIP-210ENST00000489948 FAM74A3Q4VXF1 159 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 TRPT1Q86TN4 253 aaKnown RBP9.88□□□□□ -0.83
TRAIP-210ENST00000489948 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 FAM19A4Q96LR4 140 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 VGLL1Q99990 258 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 PARLQ9H300 379 aa9.88□□□□□ -0.83
TRAIP-210ENST00000489948 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 LTAP01374 205 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF138P52744 262 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF124Q15973 351 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 ACTL10Q5JWF8 245 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 AGPAT4-IT1Q9H0P7 198 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 WFDC10AQ9H1F0 79 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 AGRNO00468 2067 aa9.87□□□□□ -0.83
TRAIP-210ENST00000489948 KNCNA6PVL3 124 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 A8MZ25 164 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 SFTA3P0C7M3 94 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 CRISP2P16562 243 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 STHQ8IWL8 128 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 LINC00479Q96M42 142 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 CITED4Q96RK1 184 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 PRR25Q96S07 402 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 PSG8Q9UQ74 426 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 ZFP30Q9Y2G7 519 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 LY96Q9Y6Y9 160 aa9.86□□□□□ -0.83
TRAIP-210ENST00000489948 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 TRAV34A0A0B4J273 112 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 TMEM218A2RU14 115 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF705DP0CH99 300 aaPredicted RBP9.85□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF705BP0CI00 300 aaPredicted RBP9.85□□□□□ -0.83
TRAIP-210ENST00000489948 CT45A10P0DMU9 189 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 ERCC8Q13216 396 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 CENPWQ5EE01 88 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 SOHLH1Q5JUK2 328 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 DEFB125Q8N687 156 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 Q8TAT8 98 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 NDFIP1Q9BT67 221 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 MLST8Q9BVC4 326 aa9.85□□□□□ -0.83
TRAIP-210ENST00000489948 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
TRAIP-210ENST00000489948 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
TRAIP-210ENST00000489948 KLLNB2CW77 178 aa9.84□□□□□ -0.83
TRAIP-210ENST00000489948 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
TRAIP-210ENST00000489948 GNG4P50150 75 aa9.84□□□□□ -0.83
TRAIP-210ENST00000489948 MORN3Q6PF18 240 aaPredicted RBP9.84□□□□□ -0.83
TRAIP-210ENST00000489948 SRD5A3Q9H8P0 318 aa9.84□□□□□ -0.83
TRAIP-210ENST00000489948 ZNF727A8MUV8 499 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 AMBPP02760 352 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 PRB4P10163 310 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-210ENST00000489948 ADCYAP1P18509 176 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 TSPOP30536 169 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 LEPP41159 167 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 CEBPGP53567 150 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 C10orf91Q5T1B1 145 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 TMEM183AQ8IXX5 376 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 ZFAND2AQ8N6M9 145 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 OR4B1Q8NGF8 309 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 TVP23CQ96ET8 276 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 SEC11CQ9BY50 192 aa9.83□□□□□ -0.84
TRAIP-210ENST00000489948 KIR2DL5BA0A0G2JN68 375 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 KIR2DL5BA0A0G2JPC4 375 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 KRBOX1C9JBD0 128 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 CDKN1BP46527 198 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 NUTF2P61970 127 aaKnown RBP9.82□□□□□ -0.84
TRAIP-210ENST00000489948 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 BAGE2Q86Y30 109 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 SLC7A5P1Q8MH63 180 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 SGK494Q96LW2 274 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 NAT8Q9UHE5 227 aa9.82□□□□□ -0.84
TRAIP-210ENST00000489948 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
TRAIP-210ENST00000489948 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
TRAIP-210ENST00000489948 SMUG1Q53HV7 270 aa9.81□□□□□ -0.84
TRAIP-210ENST00000489948 LINC00322Q6ZN03 302 aaPredicted RBP9.81□□□□□ -0.84
TRAIP-210ENST00000489948 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
TRAIP-210ENST00000489948 CARHSP1Q9Y2V2 147 aaKnown RBP9.81□□□□□ -0.84
TRAIP-210ENST00000489948 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
TRAIP-210ENST00000489948 LOC102724200A0A096LPH7 203 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms