RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 FOXE3Q13461 319 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 DLEU1O43261 78 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 DTX2Q86UW9 622 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 FAM162BQ5T6X4 162 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 GOLT1BQ9Y3E0 138 aa12.18□□□□□ -0.46
BRD9-208ENST00000489816 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
BRD9-208ENST00000489816 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
BRD9-208ENST00000489816 LMO4P61968 165 aa12.17□□□□□ -0.46
BRD9-208ENST00000489816 AJUBAQ96IF1 538 aa12.17□□□□□ -0.46
BRD9-208ENST00000489816 LYPD1Q8N2G4 141 aa12.17□□□□□ -0.46
BRD9-208ENST00000489816 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 IL17RELQ6ZVW7 336 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 CHCHD1Q96BP2 118 aaKnown RBP12.16□□□□□ -0.46
BRD9-208ENST00000489816 NOTCH3Q9UM47 2321 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 MYO9AB2RTY4 2548 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
BRD9-208ENST00000489816 EVI2AP22794 236 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 EFNA4P52798 201 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 CCDC140Q96MF4 163 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 TCF21O43680 179 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 IGHV3-11P01762 117 aa12.16□□□□□ -0.46
BRD9-208ENST00000489816 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 CKS2P33552 79 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 UBE2E1P51965 193 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 PSG9Q00887 426 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
BRD9-208ENST00000489816 CENPVL3A0A0U1RRI6 287 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
BRD9-208ENST00000489816 FER1L6-AS1Q8NA97 138 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 A0A087X0K7 114 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 NUDT3O95989 172 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 PDE6HQ13956 83 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 ZNF502Q8TBZ5 544 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 ITLN2Q8WWU7 325 aaPredicted RBP12.14□□□□□ -0.47
BRD9-208ENST00000489816 SONP18583 2426 aaKnown RBP12.14□□□□□ -0.47
BRD9-208ENST00000489816 DOPEY1Q5JWR5 2465 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 NPFFO15130 113 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 BUB3O43684 328 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 NPYP01303 97 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 NRGNQ92686 78 aa12.14□□□□□ -0.47
BRD9-208ENST00000489816 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
BRD9-208ENST00000489816 C20orf202A1L168 122 aa12.13□□□□□ -0.47
BRD9-208ENST00000489816 HSBP1L1C9JCN9 74 aa12.13□□□□□ -0.47
BRD9-208ENST00000489816 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
BRD9-208ENST00000489816 EBI3Q14213 229 aa12.13□□□□□ -0.47
BRD9-208ENST00000489816 FAM104BQ5XKR9 115 aa12.13□□□□□ -0.47
BRD9-208ENST00000489816 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 IGF1P05019 195 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 S100A7AQ86SG5 101 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 ZNF747Q9BV97 191 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 GOSR1O95249 250 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 ZFAND3Q9H8U3 227 aa12.12□□□□□ -0.47
BRD9-208ENST00000489816 A0A096LNJ9 63 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 ORMDL3Q8N138 153 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
BRD9-208ENST00000489816 HSPB8Q9UJY1 196 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 ANKRD17O75179 2603 aaKnown RBP12.11□□□□□ -0.47
BRD9-208ENST00000489816 SRD5A1P18405 259 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 Q6ZS46 218 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 OR10AG1Q8NH19 301 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 AGPAT4-IT1Q9H0P7 198 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
BRD9-208ENST00000489816 IGHV4-38-2P0DP08 117 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 CACNG7P62955 275 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 WFDC12Q8WWY7 111 aa12.1□□□□□ -0.47
BRD9-208ENST00000489816 CBY3A6NI87 242 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 TRGV3P03979 118 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
BRD9-208ENST00000489816 SLC25A34Q6PIV7 304 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 UFC1Q9Y3C8 167 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
BRD9-208ENST00000489816 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 BLCAPP62952 87 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 C5orf56Q8N8D9 126 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms