RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 HMSDA8MTL9 139 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 OPCMLQ14982 345 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 SPATA12Q7Z6I5 190 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 RNASE8Q8TDE3 154 aaKnown RBP13.58□□□□□ -0.24
APTX-229ENST00000489583 RXFP4Q8TDU9 374 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 NPCDR1Q9BY65 106 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 PARD6GQ9BYG4 376 aaPredicted RBP13.58□□□□□ -0.24
APTX-229ENST00000489583 PXMP4Q9Y6I8 212 aa13.58□□□□□ -0.24
APTX-229ENST00000489583 DYNC1H1Q14204 4646 aaKnown RBP13.58□□□□□ -0.24
APTX-229ENST00000489583 A0A0J9YY99 117 aa13.57□□□□□ -0.24
APTX-229ENST00000489583 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
APTX-229ENST00000489583 MIC13Q5XKP0 118 aa13.57□□□□□ -0.24
APTX-229ENST00000489583 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
APTX-229ENST00000489583 ZNF331Q9NQX6 463 aaPredicted RBP13.57□□□□□ -0.24
APTX-229ENST00000489583 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 A0A1B0GVG6 124 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 TAAR5O14804 337 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 GAGE7O76087 117 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 GAGE12FP0CL80 117 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 GAGE12GP0CL81 117 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 GAGE12IP0CL82 117 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 LEPP41159 167 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 C10orf113Q5VZT2 155 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 PFDN5Q99471 154 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 KRTAP4-5Q9BYR2 181 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 SLC39A9Q9NUM3 307 aa13.56□□□□□ -0.24
APTX-229ENST00000489583 A0A1W2PPQ1 181 aa13.55□□□□□ -0.24
APTX-229ENST00000489583 ZNF345Q14585 488 aa13.55□□□□□ -0.24
APTX-229ENST00000489583 Q9H3A6 140 aa13.55□□□□□ -0.24
APTX-229ENST00000489583 WFDC1Q9HC57 220 aa13.55□□□□□ -0.24
APTX-229ENST00000489583 A0A0D9SG52 128 aa13.54□□□□□ -0.24
APTX-229ENST00000489583 J3KRW8 73 aa13.54□□□□□ -0.24
APTX-229ENST00000489583 SNRPCP09234 159 aaKnown RBP13.54□□□□□ -0.24
APTX-229ENST00000489583 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
APTX-229ENST00000489583 GUK1Q16774 197 aa13.54□□□□□ -0.24
APTX-229ENST00000489583 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
APTX-229ENST00000489583 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
APTX-229ENST00000489583 ABCA13Q86UQ4 5058 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 H3BNG1 76 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 EREGO14944 169 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 C1QBP02746 253 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 PRB4P10163 310 aaPredicted RBP13.53□□□□□ -0.24
APTX-229ENST00000489583 GFI1BQ5VTD9 330 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 OR11H4Q8NGC9 324 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 HYLS1Q96M11 299 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 PYGO2Q9BRQ0 406 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
APTX-229ENST00000489583 TRAV12-3A0A0B4J271 114 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 Q8N1X5 172 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 KCNRGQ8N5I3 272 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 ARPC5LQ9BPX5 153 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 UPK3BQ9BT76 320 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.25
APTX-229ENST00000489583 KANTRA0A1W2PQU2 76 aa13.51□□□□□ -0.25
APTX-229ENST00000489583 HSD17B11Q8NBQ5 300 aa13.51□□□□□ -0.25
APTX-229ENST00000489583 ZNF680Q8NEM1 530 aa13.51□□□□□ -0.25
APTX-229ENST00000489583 MRPS16Q9Y3D3 137 aaKnown RBP13.51□□□□□ -0.25
APTX-229ENST00000489583 H3BTX0 84 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 MRPS12O15235 138 aaKnown RBP13.5□□□□□ -0.25
APTX-229ENST00000489583 PFDN1O60925 122 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 FFAR4Q5NUL3 377 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 RPL7L1Q6DKI1 246 aaKnown RBP13.5□□□□□ -0.25
APTX-229ENST00000489583 TMEM37Q8WXS4 190 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 ODF3Q96PU9 254 aa13.5□□□□□ -0.25
APTX-229ENST00000489583 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
APTX-229ENST00000489583 ESRGQ1W209 222 aa13.49□□□□□ -0.25
APTX-229ENST00000489583 LINC00612Q8N6U2 182 aa13.49□□□□□ -0.25
APTX-229ENST00000489583 PSMG3Q9BT73 122 aaPredicted RBP13.49□□□□□ -0.25
APTX-229ENST00000489583 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
APTX-229ENST00000489583 BCL2L11O43521 198 aa13.48□□□□□ -0.25
APTX-229ENST00000489583 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
APTX-229ENST00000489583 HOXA5P20719 270 aa13.48□□□□□ -0.25
APTX-229ENST00000489583 EIF5AP63241 154 aaKnown RBP13.48□□□□□ -0.25
APTX-229ENST00000489583 KIR3DS1Q14943 382 aa13.48□□□□□ -0.25
APTX-229ENST00000489583 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
APTX-229ENST00000489583 MRPL32Q9BYC8 188 aaKnown RBP13.48□□□□□ -0.25
APTX-229ENST00000489583 TMPRSS5Q9H3S3 457 aa13.48□□□□□ -0.25
APTX-229ENST00000489583 PRAC2D3DTV9 90 aa13.47□□□□□ -0.25
APTX-229ENST00000489583 SLC17A3O00476 420 aa13.47□□□□□ -0.25
APTX-229ENST00000489583 ATP6V0CP27449 155 aa13.47□□□□□ -0.25
APTX-229ENST00000489583 SERF2P84101 59 aa13.47□□□□□ -0.25
APTX-229ENST00000489583 TMUB2Q71RG4 321 aa13.47□□□□□ -0.25
APTX-229ENST00000489583 TRGV1A0A0A0MS02 117 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 MBP02144 154 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 IGLC2P0DOY2 106 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 Q6ZTI0 123 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 OR2G3Q8NGZ4 309 aa13.46□□□□□ -0.25
APTX-229ENST00000489583 ZNF471Q9BX82 626 aaPredicted RBP13.46□□□□□ -0.25
APTX-229ENST00000489583 NPIPB6E9PJ23 425 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 SIVA1O15304 175 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 GCSAMLQ5JQS6 135 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
APTX-229ENST00000489583 AAMDCQ9H7C9 122 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 CYTL1Q9NRR1 136 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
APTX-229ENST00000489583 PRELID1Q9Y255 219 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms