RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 S100A8P05109 93 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 C12orf57Q99622 126 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 TXNDC17Q9BRA2 123 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
CLDN11-209ENST00000489485 AURKAIP1Q9NWT8 199 aaPredicted RBP10.58□□□□□ -0.72
CLDN11-209ENST00000489485 SCO2A0A1W2PP80 73 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 CSN1S1P47710 185 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 CEBPGP53567 150 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
CLDN11-209ENST00000489485 RPUSD4Q96CM3 377 aaKnown RBP10.57□□□□□ -0.72
CLDN11-209ENST00000489485 DIRC3C9JPN6 131 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 F6UB75 175 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 PDE6DO43924 150 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 TCRAP04437 139 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 S100A9P06702 114 aaKnown RBP10.56□□□□□ -0.72
CLDN11-209ENST00000489485 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
CLDN11-209ENST00000489485 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
CLDN11-209ENST00000489485 RAB5AP20339 215 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 ACTL10Q5JWF8 245 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 SGK494Q96LW2 274 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 LINC00479Q96M42 142 aa10.56□□□□□ -0.72
CLDN11-209ENST00000489485 GDF5OSQ5U4N7 250 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 ZFP82Q8N141 532 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
CLDN11-209ENST00000489485 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 F6UZH7 168 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 PEX7O00628 323 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 UBE2CO00762 179 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
CLDN11-209ENST00000489485 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
CLDN11-209ENST00000489485 SMIM6P0DI80 62 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 IGHV4-30-4P0DP06 118 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 DEFB121Q5J5C9 76 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 EBLN2Q6P2I7 272 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
CLDN11-209ENST00000489485 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
CLDN11-209ENST00000489485 A0A087WWC5 75 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 TRAV34A0A0B4J273 112 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 PCP4L1A6NKN8 68 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 K7EIL1 84 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 STHQ8IWL8 128 aa10.54□□□□□ -0.72
CLDN11-209ENST00000489485 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 TMEM250H0YL14 139 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 AKR1C3P42330 323 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
CLDN11-209ENST00000489485 DEFA6Q01524 100 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 VGLL1Q99990 258 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 K7EQM0 130 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 HIST1H1AQ02539 215 aaPredicted RBP10.53□□□□□ -0.72
CLDN11-209ENST00000489485 ERCC8Q13216 396 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 OR8A1Q8NGG7 326 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 NIPSNAP3BQ9BS92 247 aa10.53□□□□□ -0.72
CLDN11-209ENST00000489485 MEGF8Q7Z7M0 2845 aa10.52□□□□□ -0.72
CLDN11-209ENST00000489485 A0A0J9YX75 114 aa10.52□□□□□ -0.73
CLDN11-209ENST00000489485 B4DEV8 164 aa10.52□□□□□ -0.73
CLDN11-209ENST00000489485 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
CLDN11-209ENST00000489485 C11orf52Q96A22 123 aa10.52□□□□□ -0.73
CLDN11-209ENST00000489485 ASCL2Q99929 193 aa10.52□□□□□ -0.73
CLDN11-209ENST00000489485 DNAH3Q8TD57 4116 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 RPL35AP18077 110 aaKnown RBP10.51□□□□□ -0.73
CLDN11-209ENST00000489485 CNN1P51911 297 aaKnown RBP10.51□□□□□ -0.73
CLDN11-209ENST00000489485 UBE2G1P62253 170 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 MRAPQ8TCY5 172 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 PARLQ9H300 379 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 H3BMM0 161 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 IGLV2-11P01706 119 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
CLDN11-209ENST00000489485 SERTM2A0A1B0GWG4 89 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 PNRC1Q12796 327 aaPredicted RBP10.5□□□□□ -0.73
CLDN11-209ENST00000489485 TMEM78Q5T7P6 136 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 Q8TAT8 98 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
CLDN11-209ENST00000489485 LOC102724200A0A096LPH7 203 aaPredicted RBP10.49□□□□□ -0.73
CLDN11-209ENST00000489485 RBMY1BA6NDE4 496 aaKnown RBP10.49□□□□□ -0.73
CLDN11-209ENST00000489485 RBMY1EA6NEQ0 496 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms