RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 KHDC3LQ587J8 217 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 FKBP1CQ5VVH2 108 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 GLIPR1L1Q6UWM5 242 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 LYZL1Q6UWQ5 148 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 HRCT1Q6UXD1 115 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 SMIM5Q71RC9 77 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 SNX29P2Q8IUI4 249 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 OR4S1Q8NGB4 309 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 OR51A4Q8NGJ6 313 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 LCN9Q8WX39 176 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 YPEL2Q96QA6 119 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 HIST1H2BLQ99880 126 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 SLC25A21Q9BQT8 299 aaPredicted RBP2.66□□□□□ -1.98
CCL20-204ENST00000489160 TMEM191AQ9H0A3 160 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 MED9Q9NWA0 146 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 CCDC167Q9P0B6 97 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 DOCK5Q9H7D0 1870 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 EEA1Q15075 1411 aa2.66□□□□□ -1.98
CCL20-204ENST00000489160 THADAQ6YHU6 1953 aa2.65□□□□□ -1.98
CCL20-204ENST00000489160 CEP290O15078 2479 aa2.65□□□□□ -1.98
CCL20-204ENST00000489160 KTN1Q86UP2 1357 aaKnown RBP2.65□□□□□ -1.98
CCL20-204ENST00000489160 LAMB2P55268 1798 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 BBIP1A8MTZ0 92 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 G3V3Q6 166 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 H7C2G1 150 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 CDC42EP2O14613 210 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 NPFFO15130 113 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 CCL5P13501 91 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 HLA-EP13747 358 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 HRES1P13985 223 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 BRS3P32247 399 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 NDUFA6P56556 154 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 SLC38A11Q08AI6 406 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 MSMO1Q15800 293 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 RTL8BQ17RB0 113 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 PRR15Q8IV56 129 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 RPP25LQ8N5L8 163 aaKnown RBP2.65□□□□□ -1.99
CCL20-204ENST00000489160 OR4C16Q8NGL9 310 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 TMEM133Q9H2Q1 129 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 HHLA3Q9XRX5 114 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 FAM215AQ9Y5M1 114 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 ZFHX4Q86UP3 3567 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 ALPK3Q96L96 1907 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 FER1L6Q2WGJ9 1857 aa2.65□□□□□ -1.99
CCL20-204ENST00000489160 KDM3BQ7LBC6 1761 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 AFDNP55196 1824 aaKnown RBP2.64□□□□□ -1.99
CCL20-204ENST00000489160 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 ARRDC5A6NEK1 342 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 TLCD2A6NGC4 264 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 J3QQQ9 107 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 SNAPC5O75971 98 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 TCL1BO95988 128 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 TRGC2P03986 189 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 UBE2BP63146 152 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 BTG2P78543 158 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 HSD52Q0P140 79 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 VMA21Q3ZAQ7 101 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 CCSMST1Q4G0I0 132 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 SIGLECL1Q8N7X8 197 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 BORCS8Q96FH0 119 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 OR4C12Q96R67 309 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 TAS2R8Q9NYW2 309 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 ANKRD26Q9UPS8 1709 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 NLRC5Q86WI3 1866 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 COL27A1Q8IZC6 1860 aaPredicted RBP2.64□□□□□ -1.99
CCL20-204ENST00000489160 RGPD2P0DJD1 1756 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 ATG2BQ96BY7 2078 aa2.64□□□□□ -1.99
CCL20-204ENST00000489160 MON2Q7Z3U7 1717 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TRGV10A0A0A0MS01 117 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TRBV7-6A0A0J9YX20 115 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 ZNF670-ZNF695F2Z2N8 137 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 H7BYZ3 331 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 C19orf84I3L1E1 186 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 IGLV6-57P01721 117 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 IGLC6P0CF74 106 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TRAPPC2P0DI81 140 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TRAPPC2BP0DI82 140 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 LINC00694P0DN24 101 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 TMBIM6P55061 237 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TPPP2P59282 170 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TMEM258P61165 79 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 SUPT4H1P63272 117 aaKnown RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 MYL5Q02045 173 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 Q5XG85 94 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 TMEM14EPQ6UXP3 125 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 LINC00299Q6ZSB3 139 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 GKN2Q86XP6 184 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 WFDC11Q8NEX6 87 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 GPX7Q96SL4 187 aaPredicted RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 TCEAL2Q9H3H9 227 aaPredicted RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 IER3IP1Q9Y5U9 82 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 KMT2BQ9UMN6 2715 aaPredicted RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 BCORQ6W2J9 1755 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 SCN10AQ9Y5Y9 1956 aa2.63□□□□□ -1.99
CCL20-204ENST00000489160 MAP2P11137 1827 aaKnown RBP2.63□□□□□ -1.99
CCL20-204ENST00000489160 ZNF106Q9H2Y7 1883 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms