RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 C10orf91Q5T1B1 145 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 GDF5OSQ5U4N7 250 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 PSG8Q9UQ74 426 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 LENEPQ9Y5L5 61 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 DUSP14O95147 198 aaKnown RBP11.86□□□□□ -0.51
CLDN11-208ENST00000488989 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
CLDN11-208ENST00000488989 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 CEBPGP53567 150 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 UBE2G1P62253 170 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 ERCC8Q13216 396 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 Q86TA4 180 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
CLDN11-208ENST00000488989 TRBV7-9A0A0J9YWB2 115 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 H3BMM0 161 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 LTAP01374 205 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF138P52744 262 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF124Q15973 351 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 GTSCR1Q86UQ5 136 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 APRG1Q8IVJ8 170 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 Q8N1Y9 231 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 SMIM12Q96EX1 92 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 FAM19A4Q96LR4 140 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 SGK494Q96LW2 274 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 ZFP30Q9Y2G7 519 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 LY96Q9Y6Y9 160 aa11.85□□□□□ -0.51
CLDN11-208ENST00000488989 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 G3V4G9 280 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 KRTAP10-11P60412 298 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 ZNF674Q2M3X9 581 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 TVP23CQ96ET8 276 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 PRR25Q96S07 402 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 MLST8Q9BVC4 326 aa11.84□□□□□ -0.51
CLDN11-208ENST00000488989 F8W036 122 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 GNG4P50150 75 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 ACTL10Q5JWF8 245 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 AMTNQ6UX39 209 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 PRNTQ86SH4 94 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 BAGE2Q86Y30 109 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.52
CLDN11-208ENST00000488989 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
CLDN11-208ENST00000488989 CRISP2P16562 243 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 TMEM241Q24JQ0 296 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
CLDN11-208ENST00000488989 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
CLDN11-208ENST00000488989 Q8TAT8 98 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 NIPSNAP3BQ9BS92 247 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 WFDC10AQ9H1F0 79 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 NAT8Q9UHE5 227 aa11.82□□□□□ -0.52
CLDN11-208ENST00000488989 NDFIP1Q9BT67 221 aa11.81□□□□□ -0.52
CLDN11-208ENST00000488989 SDF2L1Q9HCN8 221 aa11.81□□□□□ -0.52
CLDN11-208ENST00000488989 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
CLDN11-208ENST00000488989 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
CLDN11-208ENST00000488989 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
CLDN11-208ENST00000488989 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 STHQ8IWL8 128 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 OR4B1Q8NGF8 309 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 OCC1Q8TAD7 63 aa11.8□□□□□ -0.52
CLDN11-208ENST00000488989 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
CLDN11-208ENST00000488989 KLLNB2CW77 178 aa11.79□□□□□ -0.52
CLDN11-208ENST00000488989 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
CLDN11-208ENST00000488989 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-208ENST00000488989 C8orf49Q96NF6 230 aa11.79□□□□□ -0.52
CLDN11-208ENST00000488989 ASCL2Q99929 193 aa11.79□□□□□ -0.52
CLDN11-208ENST00000488989 MGAM2Q2M2H8 2515 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 K7EN84 100 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 GCGP01275 180 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 TSPOP30536 169 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 LEPP41159 167 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
CLDN11-208ENST00000488989 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 IGKV3-20P01619 116 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 CDKN1BP46527 198 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 NHLRC2Q8NBF2 726 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 SRD5A3Q9H8P0 318 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
CLDN11-208ENST00000488989 A8MZ25 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms