RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 L7N2F9 121 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 MBPP02686 304 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-206ENST00000488594 KRTAP10-1P60331 282 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 VAMP2P63027 116 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 CD300CQ08708 224 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 BTN1A1Q13410 526 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 ICAM4Q14773 271 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 MIC13Q5XKP0 118 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 NEGR1Q7Z3B1 354 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 VGLL1Q99990 258 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 HHLA3Q9XRX5 114 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
GGPS1-206ENST00000488594 M0R3E3 92 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 GPX1P07203 203 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 CRISP2P16562 243 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
GGPS1-206ENST00000488594 CRYBA4P53673 196 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 ERCC8Q13216 396 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 PDE6HQ13956 83 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 TMEM14CQ9P0S9 112 aa12.95□□□□□ -0.34
GGPS1-206ENST00000488594 RGS13O14921 159 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 TRIQKQ629K1 86 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 SLC39A9Q9NUM3 307 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 UQCC1Q9NVA1 299 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 HIST1H1EP10412 219 aaKnown RBP12.94□□□□□ -0.34
GGPS1-206ENST00000488594 RPL29P47914 159 aaKnown RBP12.94□□□□□ -0.34
GGPS1-206ENST00000488594 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 C20orf85Q9H1P6 137 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
GGPS1-206ENST00000488594 TIMM9Q9Y5J7 89 aa12.94□□□□□ -0.34
GGPS1-206ENST00000488594 NDUFB4O95168 129 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 EVI2AP22794 236 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 GCSHP23434 173 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 BCAP31P51572 246 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 CAV2P51636 162 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 ZNF846Q147U1 533 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 VWC2Q2TAL6 325 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
GGPS1-206ENST00000488594 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 CENPXA8MT69 81 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 FAM229AH3BQW9 127 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 PRAF2O60831 178 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 CST7O76096 145 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 FHL2Q14192 279 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 CNPY1Q3B7I2 92 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 CHAC2Q8WUX2 184 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 MRPL32Q9BYC8 188 aaKnown RBP12.92□□□□□ -0.34
GGPS1-206ENST00000488594 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
GGPS1-206ENST00000488594 SRIP30626 198 aa12.91□□□□□ -0.34
GGPS1-206ENST00000488594 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
GGPS1-206ENST00000488594 FAT1Q14517 4588 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 BAXQ07812 192 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 ZNF415Q09FC8 603 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 BAK1Q16611 211 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
GGPS1-206ENST00000488594 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
GGPS1-206ENST00000488594 LSM5Q9Y4Y9 91 aaKnown RBP12.9□□□□□ -0.34
GGPS1-206ENST00000488594 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
GGPS1-206ENST00000488594 K7EQD1 137 aa12.89□□□□□ -0.35
GGPS1-206ENST00000488594 SMR3BP02814 79 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-206ENST00000488594 PVALBP20472 110 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-206ENST00000488594 S100A11P31949 105 aa12.89□□□□□ -0.35
GGPS1-206ENST00000488594 WFDC10BQ8IUB3 73 aa12.89□□□□□ -0.35
GGPS1-206ENST00000488594 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
GGPS1-206ENST00000488594 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-206ENST00000488594 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 E5RGE8 158 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-206ENST00000488594 ORM1P02763 201 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 PYYP10082 97 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 BTCP35070 178 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 HBG1P69891 147 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 HBG2P69892 147 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 PRR9Q5T870 116 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
GGPS1-206ENST00000488594 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 CCSO14618 274 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 SULT1A1P50225 295 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 Q6ZSN1 163 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 TMEM70Q9BUB7 260 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
GGPS1-206ENST00000488594 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-206ENST00000488594 CCDC160A6NGH7 325 aa12.86□□□□□ -0.35
GGPS1-206ENST00000488594 FAM25EA8MYX2 175 aa12.86□□□□□ -0.35
GGPS1-206ENST00000488594 FAM122CQ6P4D5 195 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms