RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 HYPMO75409 117 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 CD5P06127 495 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 OR5G3P0C626 314 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 PET100P0DJ07 73 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 FGF7P21781 194 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 RPL29P47914 159 aaKnown RBP4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 FGL1Q08830 312 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 GCSAMLQ5JQS6 135 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 C1orf194Q5T5A4 169 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 ZNF546Q86UE3 836 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 GTSCR1Q86UQ5 136 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 APRG1Q8IVJ8 170 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 STHQ8IWL8 128 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 OR2T35Q8NGX2 323 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 DCANP1Q8TF63 244 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 SLC25A39Q9BZJ4 359 aaPredicted RBP4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 WDR61Q9GZS3 305 aaKnown RBP4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 ARV1Q9H2C2 271 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 TMEM231Q9H6L2 316 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
RTFDC1-209ENST00000487211 TRAV5A0A0B4J249 113 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 A0A1B0GVG6 124 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 RNF222A6NCQ9 220 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 HELTA6NFD8 242 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 OR4C46A6NHA9 309 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 H3BRN7 92 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 K7EQD1 137 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 MRPS12O15235 138 aaKnown RBP4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 MT3P25713 68 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 BMI1P35226 326 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 AP2S1P53680 142 aaPredicted RBP4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 DEFB131AP59861 70 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 PAFAH1B2P68402 229 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 RAB31Q13636 194 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 Q6ZRG5 221 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 LINC00305Q7Z4B0 112 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 OR8I2Q8N0Y5 310 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 STXBP6Q8NFX7 210 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 ASB13Q8WXK3 278 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 PPP1R14BQ96C90 147 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 NARS2Q96I59 477 aaKnown RBP4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 AQP10Q96PS8 301 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 ATP5SQ99766 215 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 OPRPNQ99935 248 aaPredicted RBP4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 B9D2Q9BPU9 175 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 SHANK2-AS3Q9BTD1 123 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 SCRT1Q9BWW7 348 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 NPCDR1Q9BY65 106 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 TUBA4BQ9H853 241 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 SLC25A22Q9H936 323 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 SLC39A9Q9NUM3 307 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 TNFSF18Q9UNG2 199 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 HIGD1AQ9Y241 93 aa4.5□□□□□ -1.69
RTFDC1-209ENST00000487211 FXYD6-FXYD2A0A087WZ82 144 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 SOCS3O14543 225 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 MPDU1O75352 247 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 SNRPCP09234 159 aaKnown RBP4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 ZNF688P0C7X2 276 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 DEFB1P60022 68 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 B2MP61769 119 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 HAGHQ16775 308 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 C10orf113Q5VZT2 155 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 OR10G7Q8NGN6 311 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 C11orf45Q8TAV5 145 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 NRN1Q9NPD7 142 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 PXMP4Q9Y6I8 212 aa4.49□□□□□ -1.69
RTFDC1-209ENST00000487211 TRAV8-2A0A0B4J237 113 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 H3BQ15 152 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 ARPC5O15511 151 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 COX7A2P2O60397 106 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 IFNA5P01569 189 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 CMC4P56277 68 aaPredicted RBP4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 CD300CQ08708 224 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 SPATA31B1PQ5VZV4 182 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 RPL7L1Q6DKI1 246 aaKnown RBP4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 INO80EQ8NBZ0 244 aaPredicted RBP4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 SCGB1C1Q8TD33 95 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 PARD6GQ9BYG4 376 aaPredicted RBP4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 MFFQ9GZY8 342 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 CYTL1Q9NRR1 136 aa4.48□□□□□ -1.69
RTFDC1-209ENST00000487211 AGRNO00468 2067 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 LOC102724200A0A096LPH7 203 aaPredicted RBP4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 KNCNA6PVL3 124 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 HMSDA8MTL9 139 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 C17orf112F2Z3M2 114 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 H3BTX0 84 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 EIF3GO75821 320 aaKnown RBP eCLIP4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 NXPH4O95158 308 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 PRB4P10163 310 aaPredicted RBP4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 RPL7P18124 248 aaKnown RBP4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 CXCL2P19875 107 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 ATP6V0CP27449 155 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 NUP62P37198 522 aaPredicted RBP4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 GALR1P47211 349 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 PSMG4Q5JS54 123 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms