RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ZNF705EA8MWA4 302 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-209ENST00000486618 F6UB75 175 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 RRHO14718 337 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 CTRLP40313 264 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
HDAC3-209ENST00000486618 GNB1P62873 340 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 SRPXP78539 464 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 ARFRP1Q13795 201 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 MMDQ15546 238 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 Q6P435 159 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF705AQ6ZN79 300 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-209ENST00000486618 SAXO1Q8IYX7 474 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 OR5AP2Q8NGF4 316 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 RFESDQ8TAC1 157 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 DDB2Q92466 427 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM230Q96A57 120 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM147Q9BVK8 224 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 SLC25A31Q9H0C2 315 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 KLK15Q9H2R5 256 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 JPT2Q9H910 190 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 PAM16Q9Y3D7 125 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 A0A087WZ39 114 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 J3QLW9 94 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 CXorf1O96002 111 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 ATP5G1P05496 136 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 FGF6P10767 208 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 PFN2P35080 140 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM267Q0VDI3 215 aaPredicted RBP5.11□□□□□ -1.59
HDAC3-209ENST00000486618 DHRS2Q13268 280 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 LYRM7Q5U5X0 104 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 KDM4DQ6B0I6 523 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 HRCT1Q6UXD1 115 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 LINC00311Q8N616 119 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 ANKRD29Q8N6D5 301 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 PARP11Q9NR21 331 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 KCNIP2Q9NS61 270 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 BET1LQ9NYM9 111 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 WASHC3Q9Y3C0 194 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 STARD9Q9P2P6 4700 aa5.11□□□□□ -1.59
HDAC3-209ENST00000486618 TRAV41A0A0B4J266 112 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 IGKV1-9A0A0C4DH69 117 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 IGKV1-12A0A0C4DH73 117 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 C7orf71A4D174 169 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 COLCA2A8K830 154 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 G3V318 75 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 H0YJW9 148 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 MYL12BO14950 172 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 NDUFB8O95169 186 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 NCR2O95944 276 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 IGKV1D-12P01611 117 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 IGLV1-51P01701 117 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 CTSDP07339 412 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 BCL2P10415 239 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 PPP1CCP36873 323 aaKnown RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 DAPP51397 102 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 PLGLAQ15195 96 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 C12orf74Q32Q52 190 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM30BQ3MIR4 351 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 TTC32Q5I0X7 151 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF506Q5JVG8 444 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 FAM53AQ6NSI3 398 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM179BQ7Z7N9 219 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 TTC9CQ8N5M4 171 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 OR5AK2Q8NH90 309 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 C15orf40Q8WUR7 153 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 RTN4IP1Q8WWV3 396 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 MRPS24Q96EL2 167 aaKnown RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 SPACA5Q96QH8 159 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 GGTLC1Q9BX51 225 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF331Q9NQX6 463 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-209ENST00000486618 CKLFQ9UBR5 152 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 KLK11Q9UBX7 282 aa5.1□□□□□ -1.59
HDAC3-209ENST00000486618 IGHV4OR15-8A0A075B7B6 117 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 A0A087WW49 117 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 SAA2-SAA4A0A096LPE2 208 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 A0A0B4J2A0 478 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM30CPA0ZSE6 113 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 KNCNA6PVL3 124 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 GGTLC3B5MD39 225 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 C12orf77C9JDV5 145 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 DIRC3C9JPN6 131 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 FNDC10F2Z333 226 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 H7BYZ3 331 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 M0R129 80 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 SDCBPO00560 298 aaPredicted RBP5.09□□□□□ -1.59
HDAC3-209ENST00000486618 ATP6V0E1O15342 81 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 LY6G6CO95867 125 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 HLA-DRB1P01911 266 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 HSPB1P04792 205 aaKnown RBP5.09□□□□□ -1.59
HDAC3-209ENST00000486618 LINC00694P0DN24 101 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 LPAR6P43657 344 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF85Q03923 595 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 CDK5R1Q15078 307 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 KISS1Q15726 138 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 Q499Y3 187 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 C10orf91Q5T1B1 145 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 GTSCR1Q86UQ5 136 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms