RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PRM2P04554 102 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 KCNRGQ8N5I3 272 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 OR11H4Q8NGC9 324 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 FAM19A4Q96LR4 140 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 VGLL1Q99990 258 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 ACTR3CQ9C0K3 210 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-207ENST00000486572 OTORQ9NRC9 128 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
COL1A1-207ENST00000486572 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
COL1A1-207ENST00000486572 FAM74A1Q5RGS3 127 aa13.01□□□□□ -0.33
COL1A1-207ENST00000486572 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
COL1A1-207ENST00000486572 ARPC5LQ9BPX5 153 aa13.01□□□□□ -0.33
COL1A1-207ENST00000486572 KLLNB2CW77 178 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 HTN1P15515 57 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 AZU1P20160 251 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 CMTM2Q8TAZ6 248 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 C16orf74Q96GX8 76 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 HYLS1Q96M11 299 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 NIPSNAP3BQ9BS92 247 aa13□□□□□ -0.33
COL1A1-207ENST00000486572 DYNC2H1Q8NCM8 4307 aaKnown RBP13□□□□□ -0.33
COL1A1-207ENST00000486572 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 C7orf71A4D174 169 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 PGPA6NDG6 321 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 CXorf1O96002 111 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 NMBP08949 121 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 CRISP2P16562 243 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 GCHFRP30047 84 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 ZNF138P52744 262 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 AKR1C8PQ5T2L2 129 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 Q6ZNX1 250 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
COL1A1-207ENST00000486572 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 A0A0D9SG52 128 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 SSX7Q7RTT5 188 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 Q8TAT8 98 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 SUN5Q8TC36 379 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
COL1A1-207ENST00000486572 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
COL1A1-207ENST00000486572 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 LYRM9A8MSI8 78 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 IGLL5B9A064 214 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 GPX1P07203 203 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 TCTAP57738 103 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 BTN1A1Q13410 526 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 ZFAND2AQ8N6M9 145 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 ARL6IP6Q8N6S5 226 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
COL1A1-207ENST00000486572 ST6GAL2Q96JF0 529 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 RPH3ALQ9UNE2 315 aa12.97□□□□□ -0.33
COL1A1-207ENST00000486572 KANTRA0A1W2PQU2 76 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 BCL2L11O43521 198 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
COL1A1-207ENST00000486572 DAD1P61803 113 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 CD300CQ08708 224 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 RYR3Q15413 4870 aa12.96□□□□□ -0.33
COL1A1-207ENST00000486572 PRR9Q5T870 116 aa12.95□□□□□ -0.34
COL1A1-207ENST00000486572 IQCF2Q8IXL9 164 aa12.95□□□□□ -0.34
COL1A1-207ENST00000486572 TCTE3Q8IZS6 198 aa12.95□□□□□ -0.34
COL1A1-207ENST00000486572 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
COL1A1-207ENST00000486572 ZNF471Q9BX82 626 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-207ENST00000486572 PLA2G2EQ9NZK7 142 aa12.95□□□□□ -0.34
COL1A1-207ENST00000486572 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-207ENST00000486572 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-207ENST00000486572 LY6G6CO95867 125 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 GOLT1AQ6ZVE7 132 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 LENEPQ9Y5L5 61 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 LYSTQ99698 3801 aa12.94□□□□□ -0.34
COL1A1-207ENST00000486572 PFDN1O60925 122 aa12.93□□□□□ -0.34
COL1A1-207ENST00000486572 SEC11BP0C7V7 166 aa12.93□□□□□ -0.34
COL1A1-207ENST00000486572 GNG5P63218 68 aa12.93□□□□□ -0.34
COL1A1-207ENST00000486572 LINC00467Q9BRT7 94 aa12.93□□□□□ -0.34
COL1A1-207ENST00000486572 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
COL1A1-207ENST00000486572 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
COL1A1-207ENST00000486572 GGTLC3B5MD39 225 aa12.92□□□□□ -0.34
COL1A1-207ENST00000486572 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
COL1A1-207ENST00000486572 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
COL1A1-207ENST00000486572 EIF5AP63241 154 aaKnown RBP12.92□□□□□ -0.34
COL1A1-207ENST00000486572 TMUB2Q71RG4 321 aa12.92□□□□□ -0.34
COL1A1-207ENST00000486572 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
COL1A1-207ENST00000486572 A0A1W2PRE2 83 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 MAP1LC3B2A6NCE7 125 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 SNURFLB1AK76 121 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 TCRAP04437 139 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 HTN3P15516 51 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-207ENST00000486572 EIF4E3Q8N5X7 224 aaKnown RBP12.91□□□□□ -0.34
COL1A1-207ENST00000486572 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 MAP1LC3BQ9GZQ8 125 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms