RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C19orf71A6NCJ1 209 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 A8MWP6 167 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 GBGT1Q8N5D6 347 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 P01737 135 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 TRGC2P03986 189 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 NSUN5P1Q3KNT7 163 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 CT83Q5H943 113 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 SAMD13Q5VXD3 122 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 C4orf3Q8WVX3 66 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 NRN1Q9NPD7 142 aa11.06□□□□□ -0.64
POLR2J3-204ENST00000486319 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 CT45A10P0DMU9 189 aa11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 WNK1Q9H4A3 2382 aa11.05□□□□□ -0.64
POLR2J3-204ENST00000486319 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 S100A6P06703 90 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 RPL11P62913 178 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 LINC00322Q6ZN03 302 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 TSKUQ8WUA8 353 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 NDFIP1Q9BT67 221 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 A8MWL6 223 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 LINC01619G3V211 115 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 SOCS3O14543 225 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 COX19Q49B96 90 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 TCTEX1D4Q5JR98 221 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 PRR25Q96S07 402 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 VGLL1Q99990 258 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
POLR2J3-204ENST00000486319 VWFP04275 2813 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 IZUMO1RA6ND01 250 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 KLF5Q13887 457 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 DPF1Q92782 380 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
POLR2J3-204ENST00000486319 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 TCL1AP56279 114 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 ACTL10Q5JWF8 245 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 TMEM78Q5T7P6 136 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 OR11H1Q8NG94 326 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 C8orf49Q96NF6 230 aa11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-204ENST00000486319 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 OVOL1O14753 267 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 PHOX2AO14813 284 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 PRB4P10163 310 aaPredicted RBP11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 CBLN1P23435 193 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 FRZBQ92765 325 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 PPP1R14DQ9NXH3 145 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 PEMTQ9UBM1 199 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
POLR2J3-204ENST00000486319 C2orf70A6NJV1 201 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 TRGC1P0CF51 173 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 EDN2P20800 178 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 ID1P41134 155 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 CRIP1P50238 77 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 SMUG1Q53HV7 270 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 WDR73Q6P4I2 378 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 RASL11AQ6T310 242 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 Q8TAT8 98 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 NEU1Q99519 415 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 ASCL2Q99929 193 aa11□□□□□ -0.65
POLR2J3-204ENST00000486319 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BKO60814 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 MT-ND6P03923 174 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BJP06899 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BOP23527 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BBP33778 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 ZNF138P52744 262 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 SLURP1P55000 103 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BDP58876 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BCP62807 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 FABP9Q0Z7S8 132 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 ERCC8Q13216 396 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST2H2BEQ16778 126 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms