RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 C11orf52Q96A22 123 aa12.22□□□□□ -0.45
THBS3-207ENST00000486260 AGPAT4-IT1Q9H0P7 198 aa12.22□□□□□ -0.45
THBS3-207ENST00000486260 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
THBS3-207ENST00000486260 HLA-DRB4X5D2U9 266 aa12.22□□□□□ -0.45
THBS3-207ENST00000486260 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 K7EQM0 130 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 AKR1C3P42330 323 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 CEBPGP53567 150 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 ASCL2Q99929 193 aa12.21□□□□□ -0.45
THBS3-207ENST00000486260 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 DUSP14O95147 198 aaKnown RBP12.2□□□□□ -0.46
THBS3-207ENST00000486260 STHQ8IWL8 128 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 SMDT1Q9H4I9 107 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 IGLV2-11P01706 119 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 PRB2P02812 416 aaPredicted RBP12.2□□□□□ -0.46
THBS3-207ENST00000486260 TMEM78Q5T7P6 136 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 Q8TAT8 98 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
THBS3-207ENST00000486260 NDUFS6O75380 124 aaKnown RBP12.19□□□□□ -0.46
THBS3-207ENST00000486260 CT45A10P0DMU9 189 aa12.19□□□□□ -0.46
THBS3-207ENST00000486260 FLI1Q01543 452 aaPredicted RBP12.19□□□□□ -0.46
THBS3-207ENST00000486260 SLC35B3Q9H1N7 401 aa12.19□□□□□ -0.46
THBS3-207ENST00000486260 PSG8Q9UQ74 426 aa12.19□□□□□ -0.46
THBS3-207ENST00000486260 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
THBS3-207ENST00000486260 RBMY1BA6NDE4 496 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 RPL35P42766 123 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 ZNF138P52744 262 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 UBE2G1P62253 170 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 TMEM183BQ1AE95 376 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 TRPT1Q86TN4 253 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 RPL35AP18077 110 aaKnown RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 UQCC3Q6UW78 93 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 PARLQ9H300 379 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
THBS3-207ENST00000486260 ZNF492Q9P255 531 aa12.18□□□□□ -0.46
THBS3-207ENST00000486260 A8MTW9 85 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 IGHV4-30-4P0DP06 118 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
THBS3-207ENST00000486260 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
THBS3-207ENST00000486260 Q86TA4 180 aa12.16□□□□□ -0.46
THBS3-207ENST00000486260 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
THBS3-207ENST00000486260 FXYD7P58549 80 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
THBS3-207ENST00000486260 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 TAS2R60P59551 318 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 IGF2BP2-AS1Q96M15 143 aa12.15□□□□□ -0.46
THBS3-207ENST00000486260 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 J3KRW8 73 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 K7EIL1 84 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 M0R2Z0 102 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 LTAP01374 205 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 SPINK13Q1W4C9 94 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 CENPWQ5EE01 88 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 NHLRC2Q8NBF2 726 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 ODF3Q96PU9 254 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 SMIM7Q9BQ49 75 aa12.14□□□□□ -0.47
THBS3-207ENST00000486260 LOC102724200A0A096LPH7 203 aaPredicted RBP12.13□□□□□ -0.47
THBS3-207ENST00000486260 ZNF727A8MUV8 499 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 SOHLH1Q5JUK2 328 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 TMEM218A2RU14 115 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 GNG4P50150 75 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 BTN1A1Q13410 526 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 NDFIP1Q9BT67 221 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 ZFP30Q9Y2G7 519 aa12.13□□□□□ -0.47
THBS3-207ENST00000486260 TRAV12-2A0A075B6T6 113 aa12.12□□□□□ -0.47
THBS3-207ENST00000486260 CRISP2P16562 243 aa12.12□□□□□ -0.47
THBS3-207ENST00000486260 LEPP41159 167 aa12.12□□□□□ -0.47
THBS3-207ENST00000486260 CDKN1BP46527 198 aa12.12□□□□□ -0.47
THBS3-207ENST00000486260 TRBV7-9A0A0J9YWB2 115 aa12.11□□□□□ -0.47
THBS3-207ENST00000486260 A8MZ25 164 aa12.11□□□□□ -0.47
THBS3-207ENST00000486260 TSPOP30536 169 aa12.11□□□□□ -0.47
THBS3-207ENST00000486260 NUTF2P61970 127 aaKnown RBP12.11□□□□□ -0.47
THBS3-207ENST00000486260 PRR9Q5T870 116 aa12.11□□□□□ -0.47
THBS3-207ENST00000486260 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
THBS3-207ENST00000486260 TMEM183AQ8IXX5 376 aa12.11□□□□□ -0.47
THBS3-207ENST00000486260 C9JCJ5 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms