RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DEFB130AP0DP74 79 aa8.94□□□□□ -0.98
PTCD1-205ENST00000485746 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
PTCD1-205ENST00000485746 CDC34P49427 236 aaPredicted RBP8.94□□□□□ -0.98
PTCD1-205ENST00000485746 SERF2P84101 59 aa8.94□□□□□ -0.98
PTCD1-205ENST00000485746 CMTM2Q8TAZ6 248 aa8.94□□□□□ -0.98
PTCD1-205ENST00000485746 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
PTCD1-205ENST00000485746 ZNF503Q96F45 646 aa8.94□□□□□ -0.98
PTCD1-205ENST00000485746 PSMG3Q9BT73 122 aaPredicted RBP8.94□□□□□ -0.98
PTCD1-205ENST00000485746 RPH3ALQ9UNE2 315 aa8.94□□□□□ -0.98
PTCD1-205ENST00000485746 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
PTCD1-205ENST00000485746 C7orf71A4D174 169 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 ARPC5O15511 151 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 RPL7L1Q6DKI1 246 aaKnown RBP8.93□□□□□ -0.98
PTCD1-205ENST00000485746 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 ZNF493Q6ZR52 646 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 C9orf47Q6ZRZ4 202 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 IQCF2Q8IXL9 164 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 OR2G3Q8NGZ4 309 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 RXFP4Q8TDU9 374 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 VGLL1Q99990 258 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 ACTR3CQ9C0K3 210 aaPredicted RBP8.93□□□□□ -0.98
PTCD1-205ENST00000485746 OTORQ9NRC9 128 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 TIMM8BQ9Y5J9 83 aaPredicted RBP8.93□□□□□ -0.98
PTCD1-205ENST00000485746 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
PTCD1-205ENST00000485746 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 RNF222A6NCQ9 220 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 SNURFLB1AK76 121 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 SMLR1H3BR10 107 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 TAAR5O14804 337 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 ZNF138P52744 262 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 TMEM263Q8WUH6 116 aaKnown RBP8.92□□□□□ -0.98
PTCD1-205ENST00000485746 RAB24Q969Q5 203 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 SH3BGRL3Q9H299 93 aa8.92□□□□□ -0.98
PTCD1-205ENST00000485746 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
PTCD1-205ENST00000485746 ARL14EPLP0DKL9 152 aa8.91□□□□□ -0.98
PTCD1-205ENST00000485746 BTN1A1Q13410 526 aa8.91□□□□□ -0.98
PTCD1-205ENST00000485746 AKR1C8PQ5T2L2 129 aa8.91□□□□□ -0.98
PTCD1-205ENST00000485746 PYGO2Q9BRQ0 406 aa8.91□□□□□ -0.98
PTCD1-205ENST00000485746 ZNF492Q9P255 531 aa8.91□□□□□ -0.98
PTCD1-205ENST00000485746 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 CBY3A6NI87 242 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 RGS13O14921 159 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 CXorf1O96002 111 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 NMBP08949 121 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 CD300CQ08708 224 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 Q8TAT8 98 aa8.9□□□□□ -0.98
PTCD1-205ENST00000485746 KLLNB2CW77 178 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 F5H768 121 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 STAG3L2P0CL84 134 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 STAG3L3P0CL85 134 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 GCHFRP30047 84 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
PTCD1-205ENST00000485746 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
PTCD1-205ENST00000485746 FAM210BQ96KR6 192 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 ARPC5LQ9BPX5 153 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 TMEM167BQ9NRX6 74 aa8.89□□□□□ -0.99
PTCD1-205ENST00000485746 DYNC2H1Q8NCM8 4307 aaKnown RBP8.89□□□□□ -0.99
PTCD1-205ENST00000485746 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GAGE12BA1L429 117 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 K7EQM0 130 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GAGE7O76087 117 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 ATP5G1P05496 136 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GAGE12FP0CL80 117 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GAGE12GP0CL81 117 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GAGE12IP0CL82 117 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 CRISP2P16562 243 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 ATP5G3P48201 142 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 FAM19A4Q96LR4 140 aa8.88□□□□□ -0.99
PTCD1-205ENST00000485746 IGHV1OR15-1A0A075B7D0 117 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 G3V3Q6 166 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
PTCD1-205ENST00000485746 P0DMU3 169 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 FAM231AP0DMU4 169 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 FAM231CP0DMU5 169 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 GNG5P63218 68 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 TMEM88Q6PEY1 159 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 ZFAND2AQ8N6M9 145 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 ST6GAL2Q96JF0 529 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
PTCD1-205ENST00000485746 A0A0D9SG52 128 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 CTXND1A0A1B0GTU2 59 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
PTCD1-205ENST00000485746 ANXA2RQ3ZCQ2 193 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 PRR9Q5T870 116 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 KCNRGQ8N5I3 272 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 NDFIP1Q9BT67 221 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 ZNF471Q9BX82 626 aaPredicted RBP8.86□□□□□ -0.99
PTCD1-205ENST00000485746 GSN-AS1Q9NRJ2 163 aa8.86□□□□□ -0.99
PTCD1-205ENST00000485746 CYTL1Q9NRR1 136 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms