RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CT45A10P0DMU9 189 aa12.94□□□□□ -0.34
CHMP3-207ENST00000485465 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
CHMP3-207ENST00000485465 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
CHMP3-207ENST00000485465 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
CHMP3-207ENST00000485465 MED9Q9NWA0 146 aa12.94□□□□□ -0.34
CHMP3-207ENST00000485465 LOC102724200A0A096LPH7 203 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-207ENST00000485465 TRAV8-1A0A0A6YYK1 113 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 RAB19A4D1S5 217 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 NDUFS6O75380 124 aaKnown RBP12.93□□□□□ -0.34
CHMP3-207ENST00000485465 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 AKR1C3P42330 323 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 ZNF138P52744 262 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
CHMP3-207ENST00000485465 PEA15Q15121 130 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 AMTNQ6UX39 209 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 SGK494Q96LW2 274 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 PPP1R14DQ9NXH3 145 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 ZNF492Q9P255 531 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 KLF12Q9Y4X4 402 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 NOTCH1P46531 2555 aa12.93□□□□□ -0.34
CHMP3-207ENST00000485465 LINC00862A6NCI5 91 aa12.92□□□□□ -0.34
CHMP3-207ENST00000485465 FBLL1A6NHQ2 334 aaKnown RBP12.92□□□□□ -0.34
CHMP3-207ENST00000485465 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-207ENST00000485465 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
CHMP3-207ENST00000485465 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
CHMP3-207ENST00000485465 PSG8Q9UQ74 426 aa12.92□□□□□ -0.34
CHMP3-207ENST00000485465 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
CHMP3-207ENST00000485465 S100A9P06702 114 aaKnown RBP12.91□□□□□ -0.34
CHMP3-207ENST00000485465 SRP19P09132 144 aaKnown RBP12.91□□□□□ -0.34
CHMP3-207ENST00000485465 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-207ENST00000485465 TMEM183BQ1AE95 376 aa12.91□□□□□ -0.34
CHMP3-207ENST00000485465 Q8TAT8 98 aa12.91□□□□□ -0.34
CHMP3-207ENST00000485465 FMC1Q96HJ9 113 aa12.91□□□□□ -0.34
CHMP3-207ENST00000485465 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
CHMP3-207ENST00000485465 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 C9JQL5 133 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 UBE2G1P62253 170 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-207ENST00000485465 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 ASCL2Q99929 193 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
CHMP3-207ENST00000485465 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 LEPP41159 167 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 RPL35P42766 123 aaKnown RBP12.89□□□□□ -0.35
CHMP3-207ENST00000485465 FXYD7P58549 80 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
CHMP3-207ENST00000485465 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 DERL1Q9BUN8 251 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 CSTL1Q9H114 145 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 TREM1Q9NP99 234 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 AGRNO00468 2067 aa12.89□□□□□ -0.35
CHMP3-207ENST00000485465 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 TSPOP30536 169 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 APOC4P55056 127 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 TAS2R60P59551 318 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 Q86TA4 180 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 TVP23CQ96ET8 276 aa12.88□□□□□ -0.35
CHMP3-207ENST00000485465 M0R2Z0 102 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 AMBPP02760 352 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-207ENST00000485465 CRISP2P16562 243 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 CDKN1BP46527 198 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 CEBPGP53567 150 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 DEFA6Q01524 100 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 MRAPQ8TCY5 172 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 ZFP30Q9Y2G7 519 aa12.87□□□□□ -0.35
CHMP3-207ENST00000485465 CA1P00915 261 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-207ENST00000485465 LTAP01374 205 aa12.86□□□□□ -0.35
CHMP3-207ENST00000485465 UQCC3Q6UW78 93 aa12.86□□□□□ -0.35
CHMP3-207ENST00000485465 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
CHMP3-207ENST00000485465 PARLQ9H300 379 aa12.86□□□□□ -0.35
CHMP3-207ENST00000485465 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
CHMP3-207ENST00000485465 KLLNB2CW77 178 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 UBE2CO00762 179 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
CHMP3-207ENST00000485465 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
CHMP3-207ENST00000485465 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
CHMP3-207ENST00000485465 J3KRW8 73 aa12.84□□□□□ -0.35
CHMP3-207ENST00000485465 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-207ENST00000485465 GPX1P07203 203 aa12.84□□□□□ -0.35
CHMP3-207ENST00000485465 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
CHMP3-207ENST00000485465 PRR9Q5T870 116 aa12.84□□□□□ -0.35
CHMP3-207ENST00000485465 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.36
CHMP3-207ENST00000485465 GNG4P50150 75 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms