RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 KLLNB2CW77 178 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 ZNF324O75467 553 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-205ENST00000485397 PYYP10082 97 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 HIST1H1EP10412 219 aaKnown RBP13.25□□□□□ -0.29
COL27A1-205ENST00000485397 FGF7P21781 194 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 S100A11P31949 105 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 IL15RAQ13261 267 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 RAB32Q13637 225 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 NUDT15Q9NV35 164 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
COL27A1-205ENST00000485397 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
COL27A1-205ENST00000485397 GCSAMLQ5JQS6 135 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 EIF4E3Q8N5X7 224 aaKnown RBP13.24□□□□□ -0.29
COL27A1-205ENST00000485397 ZNF680Q8NEM1 530 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 CHAC2Q8WUX2 184 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 BLNKQ8WV28 456 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 TIMM9Q9Y5J7 89 aa13.24□□□□□ -0.29
COL27A1-205ENST00000485397 BTF3P20290 206 aaKnown RBP13.23□□□□□ -0.29
COL27A1-205ENST00000485397 STX12Q86Y82 276 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 Q8N1X5 172 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 C18orf15Q96N68 181 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 FUT9Q9Y231 359 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
COL27A1-205ENST00000485397 SPINK4O60575 86 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 H2AFB2P0C5Z0 115 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 HBG1P69891 147 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 HBG2P69892 147 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 ATP6V1FQ16864 119 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 Q6ZQT7 251 aa13.22□□□□□ -0.29
COL27A1-205ENST00000485397 GPN1Q9HCN4 374 aaPredicted RBP13.22□□□□□ -0.29
COL27A1-205ENST00000485397 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.29
COL27A1-205ENST00000485397 MPDU1O75352 247 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.29
COL27A1-205ENST00000485397 GPX1P07203 203 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 LINC00315P59091 139 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 PDE6HQ13956 83 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 ICAM4Q14773 271 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 PRR9Q5T870 116 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 SCRT2Q9NQ03 307 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
COL27A1-205ENST00000485397 IGHV3-53P01767 116 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 CRISP2P16562 243 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 TCL1AP56279 114 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 FAM122CQ6P4D5 195 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 VGLL1Q99990 258 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
COL27A1-205ENST00000485397 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
COL27A1-205ENST00000485397 FAM167A-AS1Q96KT0 104 aa13.19□□□□□ -0.3
COL27A1-205ENST00000485397 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
COL27A1-205ENST00000485397 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
COL27A1-205ENST00000485397 RGS13O14921 159 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 SIVA1O15304 175 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 PAX4O43316 350 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 NHLH2Q02577 135 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 Q6ZRN7 208 aaPredicted RBP13.18□□□□□ -0.3
COL27A1-205ENST00000485397 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
COL27A1-205ENST00000485397 IGHV1OR15-1A0A075B7D0 117 aa13.17□□□□□ -0.3
COL27A1-205ENST00000485397 NMBP08949 121 aa13.17□□□□□ -0.3
COL27A1-205ENST00000485397 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
COL27A1-205ENST00000485397 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
COL27A1-205ENST00000485397 ZNF492Q9P255 531 aa13.17□□□□□ -0.3
COL27A1-205ENST00000485397 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
COL27A1-205ENST00000485397 FAM240BA0A1B0GVZ2 78 aa13.16□□□□□ -0.3
COL27A1-205ENST00000485397 NXPH4O95158 308 aa13.16□□□□□ -0.3
COL27A1-205ENST00000485397 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
COL27A1-205ENST00000485397 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
COL27A1-205ENST00000485397 OR51M1Q9H341 326 aa13.16□□□□□ -0.3
COL27A1-205ENST00000485397 SIX6O95475 246 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL27A1-205ENST00000485397 Q8TAT8 98 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 CCDC32Q9BV29 185 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 PRO0255Q9UI72 69 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
COL27A1-205ENST00000485397 OR10J4P0C629 311 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 ZNF138P52744 262 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 CRYBA4P53673 196 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 FHL2Q14192 279 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 PHYHIPLQ96FC7 376 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 PAXXQ9BUH6 204 aa13.14□□□□□ -0.31
COL27A1-205ENST00000485397 PRAF2O60831 178 aa13.13□□□□□ -0.31
COL27A1-205ENST00000485397 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
COL27A1-205ENST00000485397 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
COL27A1-205ENST00000485397 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
COL27A1-205ENST00000485397 MUC21Q5SSG8 566 aa13.12□□□□□ -0.31
COL27A1-205ENST00000485397 SLC25A31Q9H0C2 315 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms