RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	ICAM4	Q14773	271 aa		10.88	□□□□□ -0.67
NR1H3-222	ENST00000483882	ZNF506	Q5JVG8	444 aa		10.88	□□□□□ -0.67
NR1H3-222	ENST00000483882	LINC00476	Q8WZB0	136 aa		10.88	□□□□□ -0.67
NR1H3-222	ENST00000483882	RPUSD4	Q96CM3	377 aa	Known RBP	10.88	□□□□□ -0.67
NR1H3-222	ENST00000483882	EIF5A2	Q9GZV4	153 aa	Known RBP	10.88	□□□□□ -0.67
NR1H3-222	ENST00000483882	LOC102723971	A0A1B0GUV8	181 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882		C9JQL5	133 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	SPRY2	O43597	315 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	CXorf1	O96002	111 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	IFNA1	P01562	189 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	IGKV3-20	P01619	116 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	PSG9	Q00887	426 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	DEFB135	Q30KP9	77 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	AMTN	Q6UX39	209 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	OR8A1	Q8NGG7	326 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882		Q9H3A6	140 aa		10.87	□□□□□ -0.67
NR1H3-222	ENST00000483882	KIR2DL5B	A0A0G2JN68	375 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	KIR2DL5B	A0A0G2JPC4	375 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	PPT1	P50897	306 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	CNN1	P51911	297 aa	Known RBP	10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	KIR2DL5A	Q8N109	375 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	KIR2DL5B	Q8NHK3	375 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	MRPL53	Q96EL3	112 aa	Known RBP	10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	CLUHP3	Q96NS8	147 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	CSTL1	Q9H114	145 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	CLEC5A	Q9NY25	188 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	TP53TG1	Q9Y2A0	90 aa		10.86	□□□□□ -0.67
NR1H3-222	ENST00000483882	NUPR2	A6NF83	97 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	BCL2	P10415	239 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	TAGLN2	P37802	199 aa	Known RBP	10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	EBLN2	Q6P2I7	272 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882		Q6ZWC4	215 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	LYPD1	Q8N2G4	141 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	SVBP	Q8N300	66 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	OR4B1	Q8NGF8	309 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	SLC35B3	Q9H1N7	401 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	PRELID1	Q9Y255	219 aa		10.85	□□□□□ -0.67
NR1H3-222	ENST00000483882	PGP	A6NDG6	321 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	UBE2C	O00762	179 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	FXYD7	P58549	80 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	HIST1H1A	Q02539	215 aa	Predicted RBP	10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	RARRES2	Q99969	163 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	OTOR	Q9NRC9	128 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	GNG13	Q9P2W3	67 aa		10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.84	□□□□□ -0.67
NR1H3-222	ENST00000483882	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	NDUFS6	O75380	124 aa	Known RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	IGKV2D-40	P01614	121 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	SRP19	P09132	144 aa	Known RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	ERCC8	Q13216	396 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	MORN3	Q6PF18	240 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	IQCF2	Q8IXL9	164 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	CSNK1G2-AS1	Q8NCQ2	148 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	RXFP4	Q8TDU9	374 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	RNF183	Q96D59	192 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	AAMDC	Q9H7C9	122 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	MANBAL	Q9NQG1	85 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	TMEM167B	Q9NRX6	74 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	AGRN	O00468	2067 aa		10.83	□□□□□ -0.68
NR1H3-222	ENST00000483882	GGTLC3	B5MD39	225 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	NPIPB6	E9PJ23	425 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	SCO1	O75880	301 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	DUSP14	O95147	198 aa	Known RBP	10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	SNAPIN	O95295	136 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	CA1	P00915	261 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	VGLL1	Q99990	258 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	AGPAT4-IT1	Q9H0P7	198 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	VAX2	Q9UIW0	290 aa		10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882	KLK5	Q9Y337	293 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1H3-222	ENST00000483882		A0A1W2PRE2	83 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	FAM74A7	A6NL05	159 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	DIRC3	C9JPN6	131 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	CRX	O43186	299 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	CT45A10	P0DMU9	189 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	UBE2G2	P60604	165 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	SUMO1	P63165	101 aa	Known RBP	10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	GNG5	P63218	68 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	ATRAID	Q6UW56	229 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	NKX6-2	Q9C056	277 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882	XCL2	Q9UBD3	114 aa		10.81	□□□□□ -0.68
NR1H3-222	ENST00000483882		M0R2Z0	102 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	KIR3DS1	Q14943	382 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	SPINK13	Q1W4C9	94 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	SOHLH1	Q5JUK2	328 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	C9orf47	Q6ZRZ4	202 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	OR10J6P	Q8NGY7	276 aa		10.8	□□□□□ -0.68
NR1H3-222	ENST00000483882	FAM19A4	Q96LR4	140 aa		10.79	□□□□□ -0.68
NR1H3-222	ENST00000483882	PAGE4	O60829	102 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	SLC25A5	P05141	298 aa	Known RBP	10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	RBMY1A1	P0DJD3	496 aa	Known RBP	10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	RBMY1C	P0DJD4	496 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	MEF2B	Q02080	365 aa	Predicted RBP	10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	RBMY1F	Q15415	496 aa	Known RBP	10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	C1orf158	Q8N1D5	194 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	ARL6IP6	Q8N6S5	226 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	CYB561D1	Q8N8Q1	229 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	CLRN3	Q8NCR9	226 aa		10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.78	□□□□□ -0.68
NR1H3-222	ENST00000483882	EPDR1	Q9UM22	224 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms