RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 SMDT1Q9H4I9 107 aa14.7□□□□□ -0.06
TRAPPC12-220ENST00000482645 A8MZ25 164 aa14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 SFTA3P0C7M3 94 aa14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 EIF4E3Q8N5X7 224 aaKnown RBP14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 OR4B1Q8NGF8 309 aa14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 ASCL2Q99929 193 aa14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 DERL1Q9BUN8 251 aa14.69□□□□□ -0.06
TRAPPC12-220ENST00000482645 TMEM250H0YL14 139 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 HLA-DRB4P13762 266 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 HIST1H1AQ02539 215 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 ZNF674Q2M3X9 581 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 SGK494Q96LW2 274 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 LINC00479Q96M42 142 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 SLC35B3Q9H1N7 401 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 HLA-DRB4X5D2U9 266 aa14.68□□□□□ -0.06
TRAPPC12-220ENST00000482645 TRAV8-1A0A0A6YYK1 113 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 TRAV34A0A0B4J273 112 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 A0A0J9YX75 114 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 H3BMM0 161 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 K7EQM0 130 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 CNN1P51911 297 aaKnown RBP14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 C2CD4CQ8TF44 421 aa14.67□□□□□ -0.06
TRAPPC12-220ENST00000482645 SERTM2A0A1B0GWG4 89 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 UBE2G1P62253 170 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 TRPT1Q86TN4 253 aaKnown RBP14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 OR10J6PQ8NGY7 276 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 VGLL1Q99990 258 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 PARLQ9H300 379 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 RPL35P42766 123 aaKnown RBP14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 ERCC8Q13216 396 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 SBSPONQ8IVN8 264 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 ARL6IP6Q8N6S5 226 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 TMEM75Q8N9X5 138 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 OR8A1Q8NGG7 326 aa14.66□□□□□ -0.06
TRAPPC12-220ENST00000482645 NDUFS6O75380 124 aaKnown RBP14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 APOC4P55056 127 aa14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 LINC00322Q6ZN03 302 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 Q86TA4 180 aa14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 Q8TAT8 98 aa14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 FMC1Q96HJ9 113 aa14.65□□□□□ -0.06
TRAPPC12-220ENST00000482645 RBAKDNA6NC62 111 aa14.64□□□□□ -0.07
TRAPPC12-220ENST00000482645 PRNTQ86SH4 94 aa14.64□□□□□ -0.07
TRAPPC12-220ENST00000482645 B9D2Q9BPU9 175 aa14.64□□□□□ -0.07
TRAPPC12-220ENST00000482645 NPIPB6E9PJ23 425 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 DUSP14O95147 198 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 CA1P00915 261 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 FXYD7P58549 80 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 TMEM183BQ1AE95 376 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 TMEM78Q5T7P6 136 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 SMIM7Q9BQ49 75 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 CSTL1Q9H114 145 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 PPP1R14DQ9NXH3 145 aa14.63□□□□□ -0.07
TRAPPC12-220ENST00000482645 IGLV2-11P01706 119 aa14.62□□□□□ -0.07
TRAPPC12-220ENST00000482645 FLI1Q01543 452 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-220ENST00000482645 CENPWQ5EE01 88 aa14.62□□□□□ -0.07
TRAPPC12-220ENST00000482645 SOHLH1Q5JUK2 328 aa14.62□□□□□ -0.07
TRAPPC12-220ENST00000482645 PSG8Q9UQ74 426 aa14.62□□□□□ -0.07
TRAPPC12-220ENST00000482645 TMEM218A2RU14 115 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 ZNF727A8MUV8 499 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 ADCYAP1P18509 176 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 NUTF2P61970 127 aaKnown RBP14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 C9orf47Q6ZRZ4 202 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 AGPAT4-IT1Q9H0P7 198 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 KLF12Q9Y4X4 402 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 DNAH9Q9NYC9 4486 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 KIR2DL5BA0A0G2JN68 375 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 KIR2DL5BA0A0G2JPC4 375 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 GNG4P50150 75 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 KIR2DL5AQ8N109 375 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 KIR2DL5BQ8NHK3 375 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 IGF2BP2-AS1Q96M15 143 aa14.61□□□□□ -0.07
TRAPPC12-220ENST00000482645 F8W036 122 aa14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 S100A9P06702 114 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 DEFB135Q30KP9 77 aa14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 MORN3Q6PF18 240 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 NHLRC2Q8NBF2 726 aa14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 XCL2Q9UBD3 114 aa14.6□□□□□ -0.07
TRAPPC12-220ENST00000482645 TRBV20OR9-2A0A075B6H5 130 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 PGPEP1LA6NFU8 196 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 FBLL1A6NHQ2 334 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 ZNF138P52744 262 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 TAS2R60P59551 318 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 RETNQ9HD89 108 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 NBEAL2Q6ZNJ1 2754 aa14.59□□□□□ -0.07
TRAPPC12-220ENST00000482645 M0R2Z0 102 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 LTAP01374 205 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 SPINK13Q1W4C9 94 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 LINC00477Q96M19 166 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 NDFIP1Q9BT67 221 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 ZNF492Q9P255 531 aa14.58□□□□□ -0.08
TRAPPC12-220ENST00000482645 TRBV6-1A0A0K0K1D8 114 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 C9JCJ5 164 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 UBE2CO00762 179 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 CT45A10P0DMU9 189 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 FAM74A3Q4VXF1 159 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 AMTNQ6UX39 209 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 BAGE2Q86Y30 109 aa14.57□□□□□ -0.08
TRAPPC12-220ENST00000482645 J3KRW8 73 aa14.56□□□□□ -0.08
TRAPPC12-220ENST00000482645 GIG44P09565 113 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC12-220ENST00000482645 TVP23CQ96ET8 276 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms