RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 ZBTB8BQ8NAP8 495 aaPredicted RBP7.62□□□□□ -1.19
TTC28-206ENST00000480563 ZNF680Q8NEM1 530 aa7.62□□□□□ -1.19
TTC28-206ENST00000480563 ODF3Q96PU9 254 aa7.62□□□□□ -1.19
TTC28-206ENST00000480563 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
TTC28-206ENST00000480563 GSKIPQ9P0R6 139 aa7.62□□□□□ -1.19
TTC28-206ENST00000480563 HHLA3Q9XRX5 114 aa7.62□□□□□ -1.19
TTC28-206ENST00000480563 L7N2F9 121 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 SLC17A3O00476 420 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 SSNA1O43805 119 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 SSSCA1O60232 199 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
TTC28-206ENST00000480563 CRYBA4P53673 196 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 VAMP2P63027 116 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 SLAQ13239 276 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 TEPPQ6URK8 271 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 BPIFA4PQ86YQ2 179 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
TTC28-206ENST00000480563 ST6GAL2Q96JF0 529 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 C8orf49Q96NF6 230 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 MARVELD1Q9BSK0 173 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 KLF12Q9Y4X4 402 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 HMCN2Q8NDA2 5059 aa7.61□□□□□ -1.19
TTC28-206ENST00000480563 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 CCSO14618 274 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 PSCAO43653 123 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 SLC25A5P05141 298 aaKnown RBP7.6□□□□□ -1.19
TTC28-206ENST00000480563 FHL2Q14192 279 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 RGS21Q2M5E4 152 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 ANXA2RQ3ZCQ2 193 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 PXDC1Q5TGL8 231 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
TTC28-206ENST00000480563 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 NPVFQ9HCQ7 196 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
TTC28-206ENST00000480563 C7orf71A4D174 169 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 H3BQ15 152 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 K7EPK0 472 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 GOSR2O14653 212 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 TCL1AP56279 114 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 S100A10P60903 97 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 RRAS2P62070 204 aaPredicted RBP7.59□□□□□ -1.19
TTC28-206ENST00000480563 POLR2GP62487 172 aaKnown RBP eCLIP7.59□□□□□ -1.19
TTC28-206ENST00000480563 SLC38A11Q08AI6 406 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 SAT2Q96F10 170 aaPredicted RBP7.59□□□□□ -1.19
TTC28-206ENST00000480563 C2orf50Q96LR7 162 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 MRPL16Q9NX20 251 aaKnown RBP7.59□□□□□ -1.19
TTC28-206ENST00000480563 PSENENQ9NZ42 101 aa7.59□□□□□ -1.19
TTC28-206ENST00000480563 E5RGE8 158 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 TSC22D2O75157 780 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 CCNKO75909 580 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 C1QBP02746 253 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 CRYGDP07320 174 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 PET100P0DJ07 73 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 SRIP30626 198 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 TAS2R30P59541 319 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 CYCSP99999 105 aaKnown RBP7.58□□□□□ -1.2
TTC28-206ENST00000480563 ID3Q02535 119 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 CD300CQ08708 224 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 C10orf126Q8N4M7 172 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 Q8N814 137 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 VGLL1Q99990 258 aa7.58□□□□□ -1.2
TTC28-206ENST00000480563 MRPL32Q9BYC8 188 aaKnown RBP7.58□□□□□ -1.2
TTC28-206ENST00000480563 LSM5Q9Y4Y9 91 aaKnown RBP7.58□□□□□ -1.2
TTC28-206ENST00000480563 KLLNB2CW77 178 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 K7EQD1 137 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 COX7A2P2O60397 106 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
TTC28-206ENST00000480563 BCAP31P51572 246 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 ERCC8Q13216 396 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 BTN1A1Q13410 526 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 OPCMLQ14982 345 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 IBA57Q5T440 356 aaKnown RBP7.57□□□□□ -1.2
TTC28-206ENST00000480563 MORN5Q5VZ52 161 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 TMEM37Q8WXS4 190 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 SMIM8Q96KF7 97 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 MGAT4CQ9UBM8 478 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
TTC28-206ENST00000480563 RCL1Q9Y2P8 373 aaKnown RBP7.57□□□□□ -1.2
TTC28-206ENST00000480563 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 C7orf66A4D0T2 115 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 FNDC10F2Z333 226 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 AGPAT2O15120 278 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 MPDU1O75352 247 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 MBPP02686 304 aaPredicted RBP7.56□□□□□ -1.2
TTC28-206ENST00000480563 METTL15P1P0C7V9 234 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 CAV2P51636 162 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 GUK1Q16774 197 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 ZNF546Q86UE3 836 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 STX12Q86Y82 276 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 LINC00477Q96M19 166 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
TTC28-206ENST00000480563 TRAV5A0A0B4J249 113 aa7.55□□□□□ -1.2
TTC28-206ENST00000480563 RGS13O14921 159 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms