RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 IQCF2Q8IXL9 164 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 HYLS1Q96M11 299 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 VGLL1Q99990 258 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 RPH3ALQ9UNE2 315 aa8.68□□□□□ -1.02
CCM2-212ENST00000480382 LYSTQ99698 3801 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 PGPA6NDG6 321 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 ZNF705GA8MUZ8 300 aaPredicted RBP8.67□□□□□ -1.02
CCM2-212ENST00000480382 EMP1P54849 157 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 CD300CQ08708 224 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 Q8TAT8 98 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 RYR3Q15413 4870 aa8.67□□□□□ -1.02
CCM2-212ENST00000480382 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
CCM2-212ENST00000480382 GNG5P63218 68 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 BTN1A1Q13410 526 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
CCM2-212ENST00000480382 ZNF767PQ75MW2 155 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 CMTM2Q8TAZ6 248 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 SUN5Q8TC36 379 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
CCM2-212ENST00000480382 LINC01587Q99440 93 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 ZNF492Q9P255 531 aa8.66□□□□□ -1.02
CCM2-212ENST00000480382 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 TRAV12-3A0A0B4J271 114 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 NUPR2A6NF83 97 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 SLC25A5P05141 298 aaKnown RBP8.65□□□□□ -1.02
CCM2-212ENST00000480382 TPT1P13693 172 aaKnown RBP8.65□□□□□ -1.02
CCM2-212ENST00000480382 FHITP49789 147 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 ZNF138P52744 262 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 PRR9Q5T870 116 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 Q6ZTC4 211 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 GOLT1AQ6ZVE7 132 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
CCM2-212ENST00000480382 RYR2Q92736 4967 aa8.65□□□□□ -1.02
CCM2-212ENST00000480382 C7orf71A4D174 169 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 KLLNB2CW77 178 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 H7BYZ3 331 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 HTN1P15515 57 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 CRISP2P16562 243 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 AZU1P20160 251 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 TAS2R60P59551 318 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 EIF5AP63241 154 aaKnown RBP8.64□□□□□ -1.03
CCM2-212ENST00000480382 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 CEMP1Q6PRD7 247 aaPredicted RBP8.64□□□□□ -1.03
CCM2-212ENST00000480382 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 STOML3Q8TAV4 291 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 FAM213BQ8TBF2 198 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 TMED6Q8WW62 240 aa8.64□□□□□ -1.03
CCM2-212ENST00000480382 ALMS1Q8TCU4 4167 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 GPX1P07203 203 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 RNASE4P34096 147 aaKnown RBP8.63□□□□□ -1.03
CCM2-212ENST00000480382 UBE2G2P60604 165 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 NIPSNAP3BQ9BS92 247 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 DKK2Q9UBU2 259 aa8.63□□□□□ -1.03
CCM2-212ENST00000480382 TRAV8-1A0A0A6YYK1 113 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 UMAD1C9J7I0 102 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 NMBP08949 121 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
CCM2-212ENST00000480382 ZFP69Q49AA0 526 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 Q6ZQT7 251 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 ARL6IP6Q8N6S5 226 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 RNASE8Q8TDE3 154 aaKnown RBP8.62□□□□□ -1.03
CCM2-212ENST00000480382 TMEM263Q8WUH6 116 aaKnown RBP8.62□□□□□ -1.03
CCM2-212ENST00000480382 C16orf74Q96GX8 76 aa8.62□□□□□ -1.03
CCM2-212ENST00000480382 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 TEX48A0A1B0GUV7 120 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 A0A1B0GV50 99 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 A0A1W2PRE2 83 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
CCM2-212ENST00000480382 TCRAP04437 139 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 DPPA3Q6W0C5 159 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 SGK494Q96LW2 274 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
CCM2-212ENST00000480382 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
CCM2-212ENST00000480382 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms