RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 LINC00477Q96M19 166 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 VGLL1Q99990 258 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 ATG101Q9BSB4 218 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 VAX2Q9UIW0 290 aa8.23□□□□□ -1.09
CLDN11-205ENST00000480067 BCL2P10415 239 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 RBFOX3A6NFN3 312 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 PEX7O00628 323 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 UBE2CO00762 179 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 CA1P00915 261 aaPredicted RBP8.22□□□□□ -1.09
CLDN11-205ENST00000480067 CT45A10P0DMU9 189 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 ZNF138P52744 262 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 FXYD7P58549 80 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 MEF2BQ02080 365 aaPredicted RBP8.22□□□□□ -1.09
CLDN11-205ENST00000480067 RARRES2Q99969 163 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 EIF5A2Q9GZV4 153 aaKnown RBP8.22□□□□□ -1.09
CLDN11-205ENST00000480067 SLC35B3Q9H1N7 401 aa8.22□□□□□ -1.09
CLDN11-205ENST00000480067 A8MTW9 85 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 PDE6DO43924 150 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 TSPOP30536 169 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 AMTNQ6UX39 209 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 SGK494Q96LW2 274 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 ZNF492Q9P255 531 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 XCL2Q9UBD3 114 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 AGRNO00468 2067 aa8.21□□□□□ -1.1
CLDN11-205ENST00000480067 TRAV8-1A0A0A6YYK1 113 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 LOC102723971A0A1B0GUV8 181 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 FBLL1A6NHQ2 334 aaKnown RBP8.2□□□□□ -1.1
CLDN11-205ENST00000480067 M0R2Z0 102 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 AMBPP02760 352 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 LEPP41159 167 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 CDKN1BP46527 198 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 SPINK13Q1W4C9 94 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 Q8TAT8 98 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 FAM210AQ96ND0 272 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 ODF3Q96PU9 254 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 ASCL2Q99929 193 aa8.2□□□□□ -1.1
CLDN11-205ENST00000480067 TRAV34A0A0B4J273 112 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 SCO2A0A1W2PP80 73 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 GIG44P09565 113 aaPredicted RBP8.19□□□□□ -1.1
CLDN11-205ENST00000480067 UBE2G1P62253 170 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 FLI1Q01543 452 aaPredicted RBP8.19□□□□□ -1.1
CLDN11-205ENST00000480067 TOR2AQ5JU69 321 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 ZNF506Q5JVG8 444 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 Q6ZWC4 215 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 PRNTQ86SH4 94 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 PSG8Q9UQ74 426 aa8.19□□□□□ -1.1
CLDN11-205ENST00000480067 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 J3KRW8 73 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 GPX1P07203 203 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 AKR1C3P42330 323 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 FMC1Q96HJ9 113 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 RCHY1Q96PM5 261 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 NDFIP1Q9BT67 221 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 MED9Q9NWA0 146 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
CLDN11-205ENST00000480067 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 S100A9P06702 114 aaKnown RBP8.18□□□□□ -1.1
CLDN11-205ENST00000480067 DEFB135Q30KP9 77 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 C2CD4CQ8TF44 421 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 IGF2BP2-AS1Q96M15 143 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 TREM1Q9NP99 234 aa8.18□□□□□ -1.1
CLDN11-205ENST00000480067 RGS13O14921 159 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 INSP01308 110 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 CRISP2P16562 243 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
CLDN11-205ENST00000480067 PEA15Q15121 130 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 TMEM208Q9BTX3 173 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
CLDN11-205ENST00000480067 KLLNB2CW77 178 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 CRXO43186 299 aaPredicted RBP8.16□□□□□ -1.1
CLDN11-205ENST00000480067 SPRY2O43597 315 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
CLDN11-205ENST00000480067 RPL35P42766 123 aaKnown RBP8.16□□□□□ -1.1
CLDN11-205ENST00000480067 CEBPGP53567 150 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 KIR3DS1Q14943 382 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 GFI1BQ5VTD9 330 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 ZFAND2AQ8N6M9 145 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 RNF183Q96D59 192 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 TVP23CQ96ET8 276 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms