RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 ST6GAL2Q96JF0 529 aa8.17□□□□□ -1.1
GCA-208ENST00000479199 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
GCA-208ENST00000479199 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
GCA-208ENST00000479199 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
GCA-208ENST00000479199 A0A087WTM6 91 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 UBE2L5PA0A1B0GUS4 154 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 NAP1L6A6NFF2 107 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 L7N2F9 121 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 ZNF253O75346 499 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 CST7O76096 145 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 NDUFB4O95168 129 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 INPP1P49441 399 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 VAMP2P63027 116 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 BAK1Q16611 211 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 TRIQKQ629K1 86 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 Q6ZQT7 251 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 Q6ZRG5 221 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 LINC00299Q6ZSB3 139 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 FRZBQ92765 325 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
GCA-208ENST00000479199 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 C8orf49Q96NF6 230 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 LINC00467Q9BRT7 94 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 WDR83OSQ9Y284 106 aa8.16□□□□□ -1.1
GCA-208ENST00000479199 LSM5Q9Y4Y9 91 aaKnown RBP8.16□□□□□ -1.1
GCA-208ENST00000479199 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 IGKV2-40A0A087WW87 121 aaPredicted RBP8.15□□□□□ -1.1
GCA-208ENST00000479199 MPDU1O75352 247 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 IGKV2D-40P01614 121 aaPredicted RBP8.15□□□□□ -1.1
GCA-208ENST00000479199 PYYP10082 97 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 BCAP31P51572 246 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 CAV2P51636 162 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 HAMPP81172 84 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 EXOC3-AS1Q8N2X6 119 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 OR1L4Q8NGR5 311 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 MITD1Q8WV92 249 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 PFDN5Q99471 154 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.1
GCA-208ENST00000479199 FAM24AA6NFZ4 105 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 RGS13O14921 159 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
GCA-208ENST00000479199 GPX1P07203 203 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 CRISP2P16562 243 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 CRYBA4P53673 196 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 BAXQ07812 192 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 RAB31Q13636 194 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 ICAM4Q14773 271 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 IBA57Q5T440 356 aaKnown RBP8.14□□□□□ -1.11
GCA-208ENST00000479199 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 ZFAND2AQ8N6M9 145 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 VGLL1Q99990 258 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
GCA-208ENST00000479199 FAM25EA8MYX2 175 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 PRAF2O60831 178 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 IFNA5P01569 189 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 FHL2Q14192 279 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 VWC2Q2TAL6 325 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 S100ZQ8WXG8 99 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 SDHCQ99643 169 aaPredicted RBP8.13□□□□□ -1.11
GCA-208ENST00000479199 ARPC5LQ9BPX5 153 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 MDFICQ9P1T7 246 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 LY96Q9Y6Y9 160 aa8.13□□□□□ -1.11
GCA-208ENST00000479199 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 IGSF23A1L1A6 192 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 SFTA3P0C7M3 94 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
GCA-208ENST00000479199 FGF7P21781 194 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
GCA-208ENST00000479199 PDE6HQ13956 83 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 ZNF846Q147U1 533 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
GCA-208ENST00000479199 GCSAMLQ5JQS6 135 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 FAM122CQ6P4D5 195 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 NEGR1Q7Z3B1 354 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 Q8TAT8 98 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 C20orf85Q9H1P6 137 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
GCA-208ENST00000479199 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
GCA-208ENST00000479199 E5RGE8 158 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 K7EQD1 137 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 SRIP30626 198 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 S100A10P60903 97 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 ZNF415Q09FC8 603 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
GCA-208ENST00000479199 C12orf45Q8N5I9 185 aaPredicted RBP8.11□□□□□ -1.11
GCA-208ENST00000479199 SLC25A2Q9BXI2 301 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms