RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 RBAKDNA6NC62 111 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 TMEM250H0YL14 139 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 PDE6DO43924 150 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
CHD3-210ENST00000479080 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 AKR1C3P42330 323 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 PEA15Q15121 130 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 PRR9Q5T870 116 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.86
CHD3-210ENST00000479080 TMEM75Q8N9X5 138 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 PARLQ9H300 379 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 TREM1Q9NP99 234 aa9.65□□□□□ -0.86
CHD3-210ENST00000479080 SORL1Q92673 2214 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 TRBV6-1A0A0K0K1D8 114 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 RPL35P42766 123 aaKnown RBP9.64□□□□□ -0.87
CHD3-210ENST00000479080 CSN1S1P47710 185 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 TMEM183BQ1AE95 376 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
CHD3-210ENST00000479080 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 LTAP01374 205 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
CHD3-210ENST00000479080 SFTA3P0C7M3 94 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 FLI1Q01543 452 aaPredicted RBP9.63□□□□□ -0.87
CHD3-210ENST00000479080 UQCC3Q6UW78 93 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 SLC35B3Q9H1N7 401 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
CHD3-210ENST00000479080 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
CHD3-210ENST00000479080 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 CEBPGP53567 150 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 EBLN2Q6P2I7 272 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 LINC00322Q6ZN03 302 aaPredicted RBP9.62□□□□□ -0.87
CHD3-210ENST00000479080 Q6ZQT7 251 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 OR10J6PQ8NGY7 276 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 PPP1R14DQ9NXH3 145 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 DNAH9Q9NYC9 4486 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 AGRNO00468 2067 aa9.62□□□□□ -0.87
CHD3-210ENST00000479080 K7EIL1 84 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 CRISP2P16562 243 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 ZNF80P51504 273 aaPredicted RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 ZNF138P52744 262 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 FXYD7P58549 80 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 TAS2R60P59551 318 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
CHD3-210ENST00000479080 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 NHLRC2Q8NBF2 726 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 OR4B1Q8NGF8 309 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 CLUHP3Q96NS8 147 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 NOTCH1P46531 2555 aa9.61□□□□□ -0.87
CHD3-210ENST00000479080 K7EN84 100 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 M0R2Z0 102 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
CHD3-210ENST00000479080 CRIP1P50238 77 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 COX8CQ7Z4L0 72 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 LINC00477Q96M19 166 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 ODF3Q96PU9 254 aa9.6□□□□□ -0.87
CHD3-210ENST00000479080 HUWE1Q7Z6Z7 4374 aaKnown RBP9.6□□□□□ -0.87
CHD3-210ENST00000479080 KLLNB2CW77 178 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 C9JCJ5 164 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 UBE2G1P62253 170 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 STHQ8IWL8 128 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 ZC2HC1AQ96GY0 325 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
CHD3-210ENST00000479080 TRAV12-2A0A075B6T6 113 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 ZNF727A8MUV8 499 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 A8MZ25 164 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 J3KRW8 73 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 K7EQM0 130 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 BAGE2Q86Y30 109 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
CHD3-210ENST00000479080 TRBV7-9A0A0J9YWB2 115 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 FBLL1A6NHQ2 334 aaKnown RBP9.57□□□□□ -0.88
CHD3-210ENST00000479080 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms