RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM14DPA8MWL7 114 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 F8W036 122 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 LY6LH3BQJ8 138 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 C15orf65H3BRN8 121 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 GEMIN2O14893 280 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 PIN1P1O15428 100 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TGOLN2O43493 480 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ATG12O94817 140 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGLV2-8P01709 118 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 PET100P0DJ07 73 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 CXCL3P19876 107 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 GZMHP20718 246 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 S100PP25815 95 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 GNRHRP30968 328 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TAS2R60P59551 318 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 HLA-DRB3P79483 266 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 AESQ08117 197 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 LY6EQ16553 131 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 C6orf99Q4VX62 202 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ACTBL2Q562R1 376 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 KPRPQ5T749 579 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 FAM222AQ5U5X8 452 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF660Q6AZW8 331 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 GLIPR1L1Q6UWM5 242 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 UNQ9165/PRO28630Q6UXU0 137 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 Q8N6K4 173 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF645Q8N7E2 425 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 C5orf56Q8N8D9 126 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF565Q8N9K5 539 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF439Q8NDP4 499 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR5T1Q8NG75 326 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR4X2Q8NGF9 303 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR10K1Q8NGX5 313 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR1S1Q8NH92 325 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 MRPL30Q8TCC3 161 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 NEK7Q8TDX7 302 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMEM203Q969S6 136 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 LINC00477Q96M19 166 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TSNAXQ99598 290 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 PRRT1Q99946 306 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF251Q9BRH9 671 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMED9Q9BVK6 235 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 NKX6-2Q9C056 277 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 ARL6Q9H0F7 186 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 TNFSF18Q9UNG2 199 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 CBY1Q9Y3M2 126 aa2.27□□□□□ -2.05
CDC42BPA-212ENST00000478573 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHV1-3A0A0C4DH29 117 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 A0A1B0GW64 132 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR5H14A6NHG9 310 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 M0R1X1 148 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 SDCBPO00560 298 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 HMGB3O15347 200 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 YPEL1O60688 119 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 CRTAPO75718 401 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 NDUFA3O95167 84 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 NAPSAO96009 420 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 CFDP00746 253 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHG2P01859 326 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 HBZP02008 142 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 MAS1P04201 325 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 S100A9P06702 114 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 TPT1P13693 172 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 CXCL2P19875 107 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 NFYBP25208 207 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 HTR2CP28335 458 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 PRSS3P35030 304 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 GNG10P50151 68 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 RAB5CP51148 216 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 QRFPP83859 136 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 PRB3Q04118 309 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF616Q08AN1 781 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 BTN1A1Q13410 526 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 SURF2Q15527 256 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMEM69Q5SWH9 247 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 C12orf45Q8N5I9 185 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF709Q8N972 641 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR51D1Q8NGF3 324 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR10X1Q8NGY0 326 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR2T10Q8NGZ9 312 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 RTN4IP1Q8WWV3 396 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 ARL11Q969Q4 196 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 SMIM8Q96KF7 97 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 LINC00052Q96N35 136 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 YPEL2Q96QA6 119 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 MAP1LC3CQ9BXW4 147 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 NMES1Q9C002 83 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 SMCO4Q9NRQ5 59 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 COA4Q9NYJ1 87 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 C21orf62Q9NYP8 219 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 COMMD9Q9P000 198 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 METTL1Q9UBP6 276 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 TRAPPC2LQ9UL33 140 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 ANAPC10Q9UM13 185 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 HILPDAQ9Y5L2 63 aa2.26□□□□□ -2.05
CDC42BPA-212ENST00000478573 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms