RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 NPC2P61916 151 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 PSMC5P62195 406 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 RPS29P62273 56 aaKnown RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ARF6P62330 175 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 RHOBP62745 196 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 RPS28P62857 69 aaKnown RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 HPCAP84074 193 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 FABP5Q01469 135 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 SCGB2A2Q13296 93 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 JOSD1Q15040 202 aaPredicted RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ATP6V1FQ16864 119 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 IAH1Q2TAA2 248 aaPredicted RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 PIP5KL1Q5T9C9 394 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 Q6JHZ5 121 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 IZUMO2Q6UXV1 221 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 HEPN1Q6WQI6 88 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 GOLT1AQ6ZVE7 132 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 TRAPPC6BQ86SZ2 158 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 WFDC13Q8IUB5 93 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 PDZD9Q8IXQ8 264 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 TRAM1L1Q8N609 369 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ZNF321PQ8N8H1 164 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 OR5D16Q8NGK9 328 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 AGR3Q8TD06 166 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 COX7B2Q8TF08 81 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ROPN1LQ96C74 230 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 MSANTD3Q96H12 275 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ANKRD36BP1Q96IX9 119 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 FAM210AQ96ND0 272 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 MYCBPQ99417 103 aaPredicted RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 DHRS9Q9BPW9 319 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 MAP1LC3CQ9BXW4 147 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 ELOVL6Q9H5J4 265 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 METTL8Q9H825 291 aaKnown RBP-1.28□□□□□ -2.61
CALD1-218ENST00000478075 CDC42SE2Q9NRR3 84 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 CRIPTQ9P021 101 aa-1.28□□□□□ -2.61
CALD1-218ENST00000478075 NUP210Q8TEM1 1887 aaPredicted RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 LRP5O75197 1615 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 POLA1P09884 1462 aaPredicted RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 NKTRP30414 1462 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 FGD6Q6ZV73 1430 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 TRBV7-4A0A0J9YYF1 115 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 TRBV10-1A0A0K0K1A3 114 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C3orf85A0A1B0GTC6 90 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 KRT87PA6NCN2 255 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 GOLGA8MH3BSY2 632 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 H7BZZ5 65 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CDC42EP2O14613 210 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 LSM1O15116 133 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 NDUFB3O43676 98 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 NOL3O60936 208 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 OR2J2O76002 312 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 OR2H2O95918 312 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 APOC1P02654 83 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 OR5G3P0C626 314 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 OR10J4P0C629 311 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 UBCP0CG48 685 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 IDO1P14902 403 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CXCL2P19875 107 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CXCL3P19876 107 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 STOMP27105 288 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 AIF1P55008 147 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 YPEL3P61236 119 aaPredicted RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 RPS24P62847 133 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 SSBP1Q04837 148 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 PPP1R7Q15435 360 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 TRAM1Q15629 374 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 Q5VV11 94 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 RESP18Q5W5W9 173 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 HBMQ6B0K9 141 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C3orf33Q6P1S2 294 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C5orf46Q6UWT4 87 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CYP2G1PQ6ZSU1 146 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 PID1Q7Z2X4 250 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 AKAP14Q86UN6 197 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C20orf196Q8IYI0 205 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C20orf197Q8N268 126 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 EIF1ADQ8N9N8 165 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 OR4B1Q8NGF8 309 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 MRPL30Q8TCC3 161 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 DNAJB3Q8WWF6 145 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 NT5C3BQ969T7 300 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CHCHD1Q96BP2 118 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 CENPNQ96H22 339 aaPredicted RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 USMG5Q96IX5 58 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 GPX7Q96SL4 187 aaPredicted RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 BPIFA3Q9BQP9 254 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 WFDC6Q9BQY6 131 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C20orf24Q9BUV8 137 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 GON7Q9BXV9 100 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 C11orf68Q9H3H3 251 aaKnown RBP-1.29□□□□□ -2.62
CALD1-218ENST00000478075 RGCCQ9H4X1 137 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 ZC4H2Q9NQZ6 224 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 LINC00846Q9NV44 126 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 SDHAF2Q9NX18 166 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 NINJ2Q9NZG7 142 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 AP1M2Q9Y6Q5 423 aa-1.29□□□□□ -2.62
CALD1-218ENST00000478075 SPTBN5Q9NRC6 3674 aaKnown RBP-1.3□□□□□ -2.62
CALD1-218ENST00000478075 KIF15Q9NS87 1388 aa-1.3□□□□□ -2.62
CALD1-218ENST00000478075 GOLGA8QA0A0J9YX86 632 aa-1.3□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms