RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 RAB19A4D1S5 217 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 K7EMT4 169 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 PYYP10082 97 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 TFPI2P48307 235 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 GUK1Q16774 197 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 C1orf194Q5T5A4 169 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 OR8I2Q8N0Y5 310 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 FXYD5Q96DB9 178 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 GPR82Q96P67 336 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 TMPRSS5Q9H3S3 457 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
SMARCB1-206ENST00000477836 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 IGHV7-4-1A0A0J9YVY3 117 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 RBFOX3A6NFN3 312 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 BUB3O43684 328 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 HIST1H1EP10412 219 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 GALR1P47211 349 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 CMC4P56277 68 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 UBE2G2P60604 165 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 PEA15Q15121 130 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 UQCC3Q6UW78 93 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 LYPD1Q8N2G4 141 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 X6R8D5 127 aa6.93□□□□□ -1.3
SMARCB1-206ENST00000477836 IGKV3-7A0A075B6H7 116 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 PAGE4O60829 102 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 APOHP02749 345 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 MEOX2P50222 304 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 MEF2BQ02080 365 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 ICAM4Q14773 271 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 ZNF506Q5JVG8 444 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 EIF4E3Q8N5X7 224 aaKnown RBP6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 SUN5Q8TC36 379 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 GLMPQ8WWB7 406 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 RHPN1-AS1Q9BWJ2 59 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 TREM1Q9NP99 234 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 YTHDF2Q9Y5A9 579 aaKnown RBP6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 U3KQE9 123 aa6.92□□□□□ -1.3
SMARCB1-206ENST00000477836 TRBV19A0A075B6N1 114 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 A0A087X0K7 114 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 HELTA6NFD8 242 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 FAM74A7A6NL05 159 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 GGTLC3B5MD39 225 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 H3BTX0 84 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 SNRPCP09234 159 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 NBEAP1P0C6P0 100 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 ATP5G3P48201 142 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 C16orf54Q6UWD8 224 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 RXFP4Q8TDU9 374 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 BLNKQ8WV28 456 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 MDFICQ9P1T7 246 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 SMPXQ9UHP9 88 aa6.91□□□□□ -1.3
SMARCB1-206ENST00000477836 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 A0A1W2PRE2 83 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 H3BQ15 152 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 CHEK1O14757 476 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 PDE6DO43924 150 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 PDE6HQ13956 83 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 SERTAD4-AS1Q5TG53 156 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 TCEAL7Q9BRU2 100 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 NKX6-2Q9C056 277 aaPredicted RBP6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 SMDT1Q9H4I9 107 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
SMARCB1-206ENST00000477836 F6UZH7 168 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 SLC17A3O00476 420 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNF253O75346 499 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 CD5P06127 495 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 GIG44P09565 113 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 SFTA3P0C7M3 94 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 CEBPGP53567 150 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 XGP55808 180 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 RANP62826 216 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 RPL11P62913 178 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 PSG9Q00887 426 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 STHQ8IWL8 128 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 SLC50A1Q9BRV3 221 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 Q9H3A6 140 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 AAMDCQ9H7C9 122 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 NRN1Q9NPD7 142 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
SMARCB1-206ENST00000477836 TMEM250H0YL14 139 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms