RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 RANP62826 216 aaKnown RBP4.75□□□□□ -1.65
CLDN4-205ENST00000476494 SUMO1P63165 101 aaKnown RBP4.75□□□□□ -1.65
CLDN4-205ENST00000476494 SRSF3P84103 164 aaKnown RBP4.75□□□□□ -1.65
CLDN4-205ENST00000476494 C10orf91Q5T1B1 145 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 SERTAD4-AS1Q5TG53 156 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 LEMD1Q68G75 181 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 C5orf17Q8NAS9 161 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 CMTM2Q8TAZ6 248 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 C11orf52Q96A22 123 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 OTORQ9NRC9 128 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 ZNF586Q9NXT0 402 aa4.75□□□□□ -1.65
CLDN4-205ENST00000476494 CARHSP1Q9Y2V2 147 aaKnown RBP4.75□□□□□ -1.65
CLDN4-205ENST00000476494 YTHDF2Q9Y5A9 579 aaKnown RBP4.75□□□□□ -1.65
CLDN4-205ENST00000476494 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 TMEM213A2RRL7 107 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 PGPA6NDG6 321 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 C2orf70A6NJV1 201 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 APOHP02749 345 aaPredicted RBP4.74□□□□□ -1.65
CLDN4-205ENST00000476494 CBLN1P23435 193 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 PAFAH1B2P68402 229 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 PNRC1Q12796 327 aaPredicted RBP4.74□□□□□ -1.65
CLDN4-205ENST00000476494 LGALS9BQ3B8N2 356 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 TM4SF20Q53R12 229 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 Q6ZR54 194 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 SVBPQ8N300 66 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 OR9G4Q8NGQ1 327 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 BLNKQ8WV28 456 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
CLDN4-205ENST00000476494 NIPSNAP3BQ9BS92 247 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 Q9H3A6 140 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 MLXQ9UH92 298 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 EPDR1Q9UM22 224 aa4.74□□□□□ -1.65
CLDN4-205ENST00000476494 TRAV2A0A0B4J234 112 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 TRAV25A0A0B4J276 109 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 TRBV6-1A0A0K0K1D8 114 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ZNF727A8MUV8 499 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 C9JQL5 133 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ISLRO14498 428 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ZNF207O43670 478 aaKnown RBP4.73□□□□□ -1.65
CLDN4-205ENST00000476494 NDUFB4O95168 129 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 SLC25A5P05141 298 aaKnown RBP4.73□□□□□ -1.65
CLDN4-205ENST00000476494 FOLR2P14207 255 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ID1P41134 155 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ATP5G3P48201 142 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 CNN1P51911 297 aaKnown RBP4.73□□□□□ -1.65
CLDN4-205ENST00000476494 TAS2R60P59551 318 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 TMEM241Q24JQ0 296 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 DEFB125Q8N687 156 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 CYB561D1Q8N8Q1 229 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 SMIM12Q96EX1 92 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 LINC00052Q96N35 136 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ATG101Q9BSB4 218 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 WFDC10AQ9H1F0 79 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 NRN1Q9NPD7 142 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 ZNF331Q9NQX6 463 aaPredicted RBP4.73□□□□□ -1.65
CLDN4-205ENST00000476494 NAT8Q9UHE5 227 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 KLF12Q9Y4X4 402 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 LY96Q9Y6Y9 160 aa4.73□□□□□ -1.65
CLDN4-205ENST00000476494 IGHV3OR16-13A0A075B7E8 117 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 IGHV3-49A0A0A0MS15 119 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 IGHV3-74A0A0B4J1X5 117 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 IGHV3-66A0A0C4DH42 116 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 RBAKDNA6NC62 111 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 B4DEV8 164 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 C9JCJ5 164 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 M0R2N4 97 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 PEX7O00628 323 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 SNAPINO95295 136 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 TCRAP04437 139 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 CSN3P07498 182 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 CD7P09564 240 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 AKR1C3P42330 323 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 CEBPGP53567 150 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 CMC4P56277 68 aaPredicted RBP4.72□□□□□ -1.65
CLDN4-205ENST00000476494 RPL11P62913 178 aaKnown RBP4.72□□□□□ -1.65
CLDN4-205ENST00000476494 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 TCF24Q7RTU0 167 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 GTSCR1Q86UQ5 136 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 OR2K2Q8NGT1 345 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 TVP23CQ96ET8 276 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 FMC1Q96HJ9 113 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 C16orf92Q96LL3 132 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 SMIM7Q9BQ49 75 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 PARLQ9H300 379 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 BIN3Q9NQY0 253 aa4.72□□□□□ -1.65
CLDN4-205ENST00000476494 SCO2A0A1W2PP80 73 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 DIRC3C9JPN6 131 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 DNASE2O00115 360 aaPredicted RBP4.71□□□□□ -1.66
CLDN4-205ENST00000476494 TSPAN4O14817 238 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 APOC3P02656 99 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
CLDN4-205ENST00000476494 UBE2G1P62253 170 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 SNRPD3P62318 126 aaKnown RBP4.71□□□□□ -1.66
CLDN4-205ENST00000476494 PSG3Q16557 428 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 TMEM183BQ1AE95 376 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 ZNF674Q2M3X9 581 aa4.71□□□□□ -1.66
CLDN4-205ENST00000476494 SAPCD1Q5SSQ6 148 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms