RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 C4orf46Q504U0 113 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 IGLV5-52A0A0A0MRZ9 124 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 KLLNB2CW77 178 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 GPX1P07203 203 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 CAMLGP49069 296 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 TMBIM6P55061 237 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 IAH1Q2TAA2 248 aaPredicted RBP13.85□□□□□ -0.19
VPS36-203ENST00000475375 WFDC10BQ8IUB3 73 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 VGLL1Q99990 258 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 GGACTQ9BVM4 153 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 GSKIPQ9P0R6 139 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
VPS36-203ENST00000475375 E5RGE8 158 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 SRIP30626 198 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 RAB31Q13636 194 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 IBA57Q5T440 356 aaKnown RBP13.84□□□□□ -0.19
VPS36-203ENST00000475375 PCNPQ8WW12 178 aaKnown RBP13.84□□□□□ -0.19
VPS36-203ENST00000475375 DEDD2Q8WXF8 326 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 MRPL53Q96EL3 112 aaKnown RBP13.84□□□□□ -0.19
VPS36-203ENST00000475375 LINC00477Q96M19 166 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 BCL7BQ9BQE9 202 aa13.84□□□□□ -0.19
VPS36-203ENST00000475375 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 K7EP13 123 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 PSCAO43653 123 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 ZNF253O75346 499 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 FHL2Q14192 279 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 MIC13Q5XKP0 118 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 OR1L4Q8NGR5 311 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 RCL1Q9Y2P8 373 aaKnown RBP13.83□□□□□ -0.2
VPS36-203ENST00000475375 V9GYH0 126 aa13.83□□□□□ -0.2
VPS36-203ENST00000475375 NRARPQ7Z6K4 114 aa13.82□□□□□ -0.2
VPS36-203ENST00000475375 TMEM70Q9BUB7 260 aa13.82□□□□□ -0.2
VPS36-203ENST00000475375 AGPAT4-IT1Q9H0P7 198 aa13.82□□□□□ -0.2
VPS36-203ENST00000475375 FLVCR2Q9UPI3 526 aa13.82□□□□□ -0.2
VPS36-203ENST00000475375 TIMM9Q9Y5J7 89 aa13.82□□□□□ -0.2
VPS36-203ENST00000475375 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 C7orf66A4D0T2 115 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 L7N2F9 121 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 CRYGDP07320 174 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 VAMP2P63027 116 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 FAM19A4Q96LR4 140 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 PFDN5Q99471 154 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 MRPL32Q9BYC8 188 aaKnown RBP13.81□□□□□ -0.2
VPS36-203ENST00000475375 PRELID1Q9Y255 219 aa13.81□□□□□ -0.2
VPS36-203ENST00000475375 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 H3BMQ9 156 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 K7EQD1 137 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 GYPEP15421 78 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 BCAP31P51572 246 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 ZNF415Q09FC8 603 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 TMEM78Q5T7P6 136 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 C12orf45Q8N5I9 185 aaPredicted RBP13.8□□□□□ -0.2
VPS36-203ENST00000475375 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
VPS36-203ENST00000475375 NDUFB6O95139 128 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 MBPP02686 304 aaPredicted RBP13.79□□□□□ -0.2
VPS36-203ENST00000475375 SFTA3P0C7M3 94 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 CRISP2P16562 243 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 INPP1P49441 399 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 Q6ZQT7 251 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 C10orf126Q8N4M7 172 aa13.79□□□□□ -0.2
VPS36-203ENST00000475375 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
VPS36-203ENST00000475375 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
VPS36-203ENST00000475375 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
VPS36-203ENST00000475375 PRR9Q5T870 116 aa13.78□□□□□ -0.2
VPS36-203ENST00000475375 NTN5Q8WTR8 489 aaPredicted RBP13.78□□□□□ -0.2
VPS36-203ENST00000475375 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
VPS36-203ENST00000475375 AAMDCQ9H7C9 122 aa13.78□□□□□ -0.2
VPS36-203ENST00000475375 CST7O76096 145 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 NDUFB4O95168 129 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 S100A5P33763 92 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 CAV2P51636 162 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 C9orf47Q6ZRZ4 202 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 ZFAND2AQ8N6M9 145 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 UQCC1Q9NVA1 299 aa13.77□□□□□ -0.21
VPS36-203ENST00000475375 NMBP08949 121 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 PYYP10082 97 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 BAXQ07812 192 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 FAM122CQ6P4D5 195 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 ZNF479Q96JC4 524 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 TXNDC17Q9BRA2 123 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 TMEM14CQ9P0S9 112 aa13.76□□□□□ -0.21
VPS36-203ENST00000475375 LSM5Q9Y4Y9 91 aaKnown RBP13.76□□□□□ -0.21
VPS36-203ENST00000475375 UBE2L5PA0A1B0GUS4 154 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 ORM1P02763 201 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 PDE6HQ13956 83 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 WDR83OSQ9Y284 106 aa13.75□□□□□ -0.21
VPS36-203ENST00000475375 NAP1L6A6NFF2 107 aa13.74□□□□□ -0.21
VPS36-203ENST00000475375 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
VPS36-203ENST00000475375 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
VPS36-203ENST00000475375 LRCOL1A6NCL2 159 aa13.73□□□□□ -0.21
VPS36-203ENST00000475375 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
VPS36-203ENST00000475375 C9JCJ5 164 aa13.73□□□□□ -0.21
VPS36-203ENST00000475375 CCSO14618 274 aa13.73□□□□□ -0.21
VPS36-203ENST00000475375 PLA2G1BP04054 148 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms