RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 ZNF493Q6ZR52 646 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 KCNRGQ8N5I3 272 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 RXFP4Q8TDU9 374 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 RPUSD4Q96CM3 377 aaKnown RBP9.7□□□□□ -0.86
CCDC78-209ENST00000474647 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
CCDC78-209ENST00000474647 WFDC1Q9HC57 220 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 ZNF586Q9NXT0 402 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
CCDC78-209ENST00000474647 A0A0D9SG52 128 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 H7BYZ3 331 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
CCDC78-209ENST00000474647 HOXA5P20719 270 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 ZNF266Q14584 549 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 KIR3DS1Q14943 382 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 ESRGQ1W209 222 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 CCDC28AQ8IWP9 274 aa9.69□□□□□ -0.86
CCDC78-209ENST00000474647 WDR61Q9GZS3 305 aaKnown RBP9.69□□□□□ -0.86
CCDC78-209ENST00000474647 EPM2AB3EWF7 344 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 J3KRW8 73 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 TAAR5O14804 337 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 MPDU1O75352 247 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
CCDC78-209ENST00000474647 FGF7P21781 194 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 MGST2Q99735 147 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 ARPC5LQ9BPX5 153 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 ARL6Q9H0F7 186 aa9.68□□□□□ -0.86
CCDC78-209ENST00000474647 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
CCDC78-209ENST00000474647 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
CCDC78-209ENST00000474647 A0A1W2PPQ1 181 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 AGPAT2O15120 278 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 BCL2L11O43521 198 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 ATP6V1G1O75348 118 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 IFNA5P01569 189 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 LINC00315P59091 139 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 OPCMLQ14982 345 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 LGALSLQ3ZCW2 172 aaPredicted RBP9.67□□□□□ -0.86
CCDC78-209ENST00000474647 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 C9orf62Q8N4C0 152 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 ZNF503Q96F45 646 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 C20orf144Q9BQM9 153 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 NPCDR1Q9BY65 106 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 TMPRSS5Q9H3S3 457 aa9.67□□□□□ -0.86
CCDC78-209ENST00000474647 RGS13O14921 159 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC78-209ENST00000474647 CAMLGP49069 296 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 PLP1P60201 277 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 SELENOTP62341 195 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 RAB31Q13636 194 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
CCDC78-209ENST00000474647 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 TMUB2Q71RG4 321 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 ARV1Q9H2C2 271 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
CCDC78-209ENST00000474647 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 KANTRA0A1W2PQU2 76 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 H3BTX0 84 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 RPL29P47914 159 aaKnown RBP9.65□□□□□ -0.86
CCDC78-209ENST00000474647 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 SCGB1C1Q8TD33 95 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 ZNF331Q9NQX6 463 aaPredicted RBP9.65□□□□□ -0.86
CCDC78-209ENST00000474647 KCNIP2Q9NS61 270 aa9.65□□□□□ -0.86
CCDC78-209ENST00000474647 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 C17orf112F2Z3M2 114 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
CCDC78-209ENST00000474647 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 Q6ZTI0 123 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 RNF24Q9Y225 148 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 TIMM9Q9Y5J7 89 aa9.64□□□□□ -0.87
CCDC78-209ENST00000474647 PRAC2D3DTV9 90 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 H3BNG1 76 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 SLC17A3O00476 420 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 INAFM2P0DMQ5 153 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 PXDC1Q5TGL8 231 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 PSMG3Q9BT73 122 aaPredicted RBP9.63□□□□□ -0.87
CCDC78-209ENST00000474647 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
CCDC78-209ENST00000474647 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
CCDC78-209ENST00000474647 TRGV2A0A075B6R0 118 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 A0A096LPF7 62 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 EREGO14944 169 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 SIVA1O15304 175 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 STOML3Q8TAV4 291 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
CCDC78-209ENST00000474647 LEPP41159 167 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 ERVFC1-1P60608 527 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 EIF5AP63241 154 aaKnown RBP9.61□□□□□ -0.87
CCDC78-209ENST00000474647 Q5VSD8 79 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 Q6ZRN7 208 aaPredicted RBP9.61□□□□□ -0.87
CCDC78-209ENST00000474647 SLC7A5P1Q8MH63 180 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms