RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 MRPS16Q9Y3D3 137 aaKnown RBP3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 ARL2-SNX15V9GYD0 113 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 ATRQ13535 2644 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MUC21A0A0G2JKD1 596 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 PGPA6NDG6 321 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 CRIP2P52943 208 aaPredicted RBP3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MFAP2P55001 183 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 Q0VG73 95 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MUC21Q5SSG8 566 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MRPL54Q6P161 138 aaKnown RBP3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 ZNF562Q6V9R5 426 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 NDUFA11Q86Y39 141 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 OR4F17Q8NGA8 305 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 OR1L4Q8NGR5 311 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 OR1B1Q8NGR6 318 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 BLNKQ8WV28 456 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 IGF2BP2-AS1Q96M15 143 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 MRPL32Q9BYC8 188 aaKnown RBP3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 FBXL15Q9H469 300 aa3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 TSSC4Q9Y5U2 329 aaPredicted RBP3.25□□□□□ -1.89
GAPVD1-216ENST00000474637 IGHV7-81A0A0B4J1V7 117 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 SMIM27A0A1W2PRY6 76 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 SH2D7A6NKC9 451 aaPredicted RBP3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 H0Y8G0 127 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 H3BTX0 84 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 CORTO00230 105 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TAX1BP3O14907 124 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 CRYGBP07316 175 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 ELANEP08246 267 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 KRTAP10-3P60369 221 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 GNG5P63218 68 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 FOXE3Q13461 319 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TMEM136Q6ZRR5 245 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 Q6ZS46 218 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 ZNF329Q86UD4 541 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 PPP1R27Q86WC6 154 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TSKUQ8WUA8 353 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 FXYD5Q96DB9 178 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TRAV41A0A0B4J266 112 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 H3BUA1 57 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 SNAI2O43623 268 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 GNG7O60262 68 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 CNIH1O95406 144 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 NBEAP1P0C6P0 100 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 CD28P10747 220 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 RPL27AP46776 148 aaKnown RBP3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 RHOGP84095 191 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 PSG9Q00887 426 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 PMCHL1Q16048 86 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TMEM95Q3KNT9 176 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 THAP8Q8NA92 274 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 ARPC1AQ92747 370 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 SMIM12Q96EX1 92 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 MCRIP2Q9BUT9 160 aaKnown RBP3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 ZNF331Q9NQX6 463 aaPredicted RBP3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 TIMM8BQ9Y5J9 83 aaPredicted RBP3.24□□□□□ -1.89
GAPVD1-216ENST00000474637 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 TRAV9-2A0A087WT02 112 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 TRBV9A0A0B4J1U6 114 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 TRAV8-6A0A0B4J262 113 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 hDV102S1A0JD36 115 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 IZUMO1RA6ND01 250 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 M0R2Z0 102 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 PEX7O00628 323 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 ATP6V0E1O15342 81 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 HSBP1O75506 76 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 IGHG4P01861 327 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 APCSP02743 223 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 SLC25A5P05141 298 aaKnown RBP3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 CRYGCP07315 174 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 MYCNOSP40205 109 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 CFHR3Q02985 330 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 EBLN2Q6P2I7 272 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 WDR73Q6P4I2 378 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 RNF152Q8N8N0 203 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 TMEM116Q8NCL8 245 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 NAA38Q9BRA0 125 aaKnown RBP3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 PLXNB1O43157 2135 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 A0A087X0K7 114 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 GAGE10A6NGK3 116 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 LINC01548A6NM66 108 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 TEX22C9J3V5 150 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 BMPR1BO00238 502 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 BRI3O95415 125 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 MT-ND6P03923 174 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 PRB4P10163 310 aaPredicted RBP3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 CAMPP49913 170 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 UBE2G1P62253 170 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 SLAQ13239 276 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 OR10J3Q5JRS4 329 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 BVES-AS1Q5T3Y7 98 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 RNASEKQ6P5S7 137 aaKnown RBP3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 SPATA12Q7Z6I5 190 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 STXBP6Q8NFX7 210 aa3.23□□□□□ -1.89
GAPVD1-216ENST00000474637 OR1N2Q8NGR9 330 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms