RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 RPL35P42766 123 aaKnown RBP6.18□□□□□ -1.42
CNN3-205ENST00000474409 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
CNN3-205ENST00000474409 FLI1Q01543 452 aaPredicted RBP6.18□□□□□ -1.42
CNN3-205ENST00000474409 ERCC8Q13216 396 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 NDUFA5Q16718 116 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 TMEM183BQ1AE95 376 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 C9orf47Q6ZRZ4 202 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 VGLL1Q99990 258 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 DERL1Q9BUN8 251 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 SLC35B3Q9H1N7 401 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 PARLQ9H300 379 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 SRD5A3Q9H8P0 318 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
CNN3-205ENST00000474409 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 H3BMM0 161 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 S100A9P06702 114 aaKnown RBP6.17□□□□□ -1.42
CNN3-205ENST00000474409 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
CNN3-205ENST00000474409 GNG4P50150 75 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 ZNF138P52744 262 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 EIF4E3Q8N5X7 224 aaKnown RBP6.17□□□□□ -1.42
CNN3-205ENST00000474409 LINC00477Q96M19 166 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 SMIM7Q9BQ49 75 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 TUBA4BQ9H853 241 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 ZNF492Q9P255 531 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 PSG8Q9UQ74 426 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CNN3-205ENST00000474409 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 C9JQL5 133 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 J3KRW8 73 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 IGLV2-11P01706 119 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 LEPP41159 167 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 FXYD7P58549 80 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 TAS2R60P59551 318 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 NUTF2P61970 127 aaKnown RBP6.16□□□□□ -1.42
CNN3-205ENST00000474409 SOHLH1Q5JUK2 328 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 KPRPQ5T749 579 aaPredicted RBP6.16□□□□□ -1.42
CNN3-205ENST00000474409 TRPT1Q86TN4 253 aaKnown RBP6.16□□□□□ -1.42
CNN3-205ENST00000474409 NHLRC2Q8NBF2 726 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 ODF3Q96PU9 254 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 ASCL2Q99929 193 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 AGPAT4-IT1Q9H0P7 198 aa6.16□□□□□ -1.42
CNN3-205ENST00000474409 AURKAIP1Q9NWT8 199 aaPredicted RBP6.16□□□□□ -1.42
CNN3-205ENST00000474409 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 LOC102724200A0A096LPH7 203 aaPredicted RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 RBMY1BA6NDE4 496 aaKnown RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 RBMY1EA6NEQ0 496 aaKnown RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 C9JCJ5 164 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 M0R2Z0 102 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 LTAP01374 205 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 PRB2P02812 416 aaPredicted RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 RBMY1DP0C7P1 496 aaKnown RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 CT45A10P0DMU9 189 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 IGHV4-30-4P0DP06 118 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 MGST1P10620 155 aaKnown RBP6.15□□□□□ -1.42
CNN3-205ENST00000474409 TSPOP30536 169 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 CDKN1BP46527 198 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 SPINK13Q1W4C9 94 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 FAM74A3Q4VXF1 159 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 BAGE2Q86Y30 109 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 Q8N1Y9 231 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 IGF2BP2-AS1Q96M15 143 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 ZFP30Q9Y2G7 519 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
CNN3-205ENST00000474409 TRBV7-9A0A0J9YWB2 115 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 PGPEP1LA6NFU8 196 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 A8MTW9 85 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 F8W036 122 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
CNN3-205ENST00000474409 INSP01308 110 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 GPX1P07203 203 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 APOC4P55056 127 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 MORN3Q6PF18 240 aaPredicted RBP6.14□□□□□ -1.43
CNN3-205ENST00000474409 AMTNQ6UX39 209 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 TMEM183AQ8IXX5 376 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 SLC7A5P1Q8MH63 180 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 SMIM12Q96EX1 92 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 C8orf49Q96NF6 230 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 NIPSNAP3BQ9BS92 247 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 NAT8Q9UHE5 227 aa6.14□□□□□ -1.43
CNN3-205ENST00000474409 MGAM2Q2M2H8 2515 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 TRBV20OR9-2A0A075B6H5 130 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 TRAV12-2A0A075B6T6 113 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 TMEM218A2RU14 115 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 GCGP01275 180 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 AMBPP02760 352 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 CRISP2P16562 243 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 ADCYAP1P18509 176 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 ADIRFQ15847 76 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 PRR9Q5T870 116 aa6.13□□□□□ -1.43
CNN3-205ENST00000474409 FAM19A4Q96LR4 140 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms