RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 OR10G9Q8NGN4 311 aa10.06□□□□□ -0.8
TOP3B-215ENST00000470338 OR10G7Q8NGN6 311 aa10.06□□□□□ -0.8
TOP3B-215ENST00000470338 KLLNB2CW77 178 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
TOP3B-215ENST00000470338 SERF2P84101 59 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 PQLC2Q6ZP29 291 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 ZNF493Q6ZR52 646 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 VGLL1Q99990 258 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 Q9H3A6 140 aa10.05□□□□□ -0.8
TOP3B-215ENST00000470338 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-215ENST00000470338 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
TOP3B-215ENST00000470338 EIF3GO75821 320 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOP3B-215ENST00000470338 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-215ENST00000470338 NMBP08949 121 aa10.04□□□□□ -0.8
TOP3B-215ENST00000470338 HTN1P15515 57 aa10.04□□□□□ -0.8
TOP3B-215ENST00000470338 CRISP2P16562 243 aa10.04□□□□□ -0.8
TOP3B-215ENST00000470338 DAD1P61803 113 aa10.04□□□□□ -0.8
TOP3B-215ENST00000470338 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
TOP3B-215ENST00000470338 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
TOP3B-215ENST00000470338 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 J3KRW8 73 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 ZNF324O75467 553 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-215ENST00000470338 MBP02144 154 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 CSN1S1P47710 185 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
TOP3B-215ENST00000470338 FAM210BQ96KR6 192 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 ZNF492Q9P255 531 aa10.03□□□□□ -0.8
TOP3B-215ENST00000470338 BORCS7-ASMTA0A0B4J1R7 106 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 C7orf71A4D174 169 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 STAG3L2P0CL84 134 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 STAG3L3P0CL85 134 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 CDC34P49427 236 aaPredicted RBP10.02□□□□□ -0.81
TOP3B-215ENST00000470338 CD300CQ08708 224 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 RAB24Q969Q5 203 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
TOP3B-215ENST00000470338 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 TIMM8BQ9Y5J9 83 aaPredicted RBP10.02□□□□□ -0.81
TOP3B-215ENST00000470338 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
TOP3B-215ENST00000470338 PGPA6NDG6 321 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 TAAR5O14804 337 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 HMGB3O15347 200 aaKnown RBP10.01□□□□□ -0.81
TOP3B-215ENST00000470338 GPX1P07203 203 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 ZNF138P52744 262 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 CCDC28AQ8IWP9 274 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 ARL6IP6Q8N6S5 226 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 SUN5Q8TC36 379 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
TOP3B-215ENST00000470338 ARPC5O15511 151 aa10□□□□□ -0.81
TOP3B-215ENST00000470338 DEFB130BP0DP73 79 aa10□□□□□ -0.81
TOP3B-215ENST00000470338 DEFB130AP0DP74 79 aa10□□□□□ -0.81
TOP3B-215ENST00000470338 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
TOP3B-215ENST00000470338 BTN1A1Q13410 526 aa10□□□□□ -0.81
TOP3B-215ENST00000470338 NOP10Q9NPE3 64 aaKnown RBP10□□□□□ -0.81
TOP3B-215ENST00000470338 CBY3A6NI87 242 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 SMLR1H3BR10 107 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 HTN3P15516 51 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 GCHFRP30047 84 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 FAM74A1Q5RGS3 127 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 PRR9Q5T870 116 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 LINC00612Q8N6U2 182 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 TMED6Q8WW62 240 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 HYLS1Q96M11 299 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 ACTR3CQ9C0K3 210 aaPredicted RBP9.99□□□□□ -0.81
TOP3B-215ENST00000470338 CYTL1Q9NRR1 136 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 LENEPQ9Y5L5 61 aa9.99□□□□□ -0.81
TOP3B-215ENST00000470338 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
TOP3B-215ENST00000470338 Q6ZNX1 250 aa9.98□□□□□ -0.81
TOP3B-215ENST00000470338 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
TOP3B-215ENST00000470338 Q8TAT8 98 aa9.98□□□□□ -0.81
TOP3B-215ENST00000470338 CMTM2Q8TAZ6 248 aa9.98□□□□□ -0.81
TOP3B-215ENST00000470338 HMSDA8MTL9 139 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 SNURFLB1AK76 121 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 CXorf1O96002 111 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 ATP5G1P05496 136 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 ATP5G3P48201 142 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
TOP3B-215ENST00000470338 ZNF345Q14585 488 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 Q6ZQT7 251 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 SSX7Q7RTT5 188 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 KCNRGQ8N5I3 272 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 C11orf72Q8NBR9 251 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 OR11H4Q8NGC9 324 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
TOP3B-215ENST00000470338 P0DMU3 169 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 FAM231AP0DMU4 169 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 FAM231CP0DMU5 169 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 ZNF726P1Q15940 193 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 TMEM88Q6PEY1 159 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 ZNF680Q8NEM1 530 aa9.96□□□□□ -0.82
TOP3B-215ENST00000470338 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms