RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 YIF1AO95070 293 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 IGHV3-48P01763 117 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 PLP1P60201 277 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 GUK1Q16774 197 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 ZNF600Q6ZNG1 722 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 OR1B1Q8NGR6 318 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 ZNF414Q96IQ9 312 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 RBFOX3A6NFN3 312 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
HDAC6-217ENST00000469223 CD5P06127 495 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 STAG3L2P0CL84 134 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 PSG1P11464 419 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 ORM2P19652 201 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 LYZP61626 148 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 ZNF90Q03938 601 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 ICAM4Q14773 271 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 TIGITQ495A1 244 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 NIPSNAP3BQ9BS92 247 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 GNG13Q9P2W3 67 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 VAX2Q9UIW0 290 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 ARL2-SNX15V9GYD0 113 aa8.85□□□□□ -0.99
HDAC6-217ENST00000469223 A0A1B0GV50 99 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 OR7C2O60412 319 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 IL4P05112 153 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 BCL2P10415 239 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 TOR2AQ5JU69 321 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 NKX6-2Q9C056 277 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-217ENST00000469223 DKK2Q9UBU2 259 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 RABAC1Q9UI14 185 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
HDAC6-217ENST00000469223 IGKV1-17P01599 117 aa8.83□□□□□ -1
HDAC6-217ENST00000469223 ARL14EPLP0DKL9 152 aa8.83□□□□□ -1
HDAC6-217ENST00000469223 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
HDAC6-217ENST00000469223 FGF8P55075 233 aaPredicted RBP8.83□□□□□ -1
HDAC6-217ENST00000469223 ZNF726P1Q15940 193 aa8.83□□□□□ -1
HDAC6-217ENST00000469223 SEPSECSQ9HD40 501 aaKnown RBP8.83□□□□□ -1
HDAC6-217ENST00000469223 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
HDAC6-217ENST00000469223 DOK5Q9P104 306 aa8.83□□□□□ -1
HDAC6-217ENST00000469223 XCL2Q9UBD3 114 aa8.83□□□□□ -1
HDAC6-217ENST00000469223 TMEM189A5PLL7 270 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 PDE6DO43924 150 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 ZNF688P0C7X2 276 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
HDAC6-217ENST00000469223 GCSAMLQ5JQS6 135 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 ZNF506Q5JVG8 444 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 BPIFA4PQ86YQ2 179 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 UHRF2Q96PU4 802 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 SLC35B3Q9H1N7 401 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
HDAC6-217ENST00000469223 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 IGHV3-66A0A0C4DH42 116 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TEX48A0A1B0GUV7 120 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 LOC102723971A0A1B0GUV8 181 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TMEM218A2RU14 115 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 F6UZH7 168 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 F8W036 122 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 HMGB3O15347 200 aaKnown RBP8.81□□□□□ -1
HDAC6-217ENST00000469223 GCHFRP30047 84 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
HDAC6-217ENST00000469223 MEF2BQ02080 365 aaPredicted RBP8.81□□□□□ -1
HDAC6-217ENST00000469223 TTC32Q5I0X7 151 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TOMM20LQ6UXN7 152 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TMEM37Q8WXS4 190 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 GPR82Q96P67 336 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 METTL26Q96S19 204 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TCEAL7Q9BRU2 100 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 PAXXQ9BUH6 204 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 OR51M1Q9H341 326 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 TMEM231Q9H6L2 316 aa8.81□□□□□ -1
HDAC6-217ENST00000469223 PUS1Q9Y606 427 aaKnown RBP eCLIP8.81□□□□□ -1
HDAC6-217ENST00000469223 A0A1W2PS18 150 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 TMEM250H0YL14 139 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 NUDT3O95989 172 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
HDAC6-217ENST00000469223 SFTA3P0C7M3 94 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 RPL7P18124 248 aaKnown RBP8.8□□□□□ -1
HDAC6-217ENST00000469223 CST9LP1Q5W188 147 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 MIR17HGQ75NE6 70 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 GRAMD2BQ96HH9 432 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 SEC11CQ9BY50 192 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
HDAC6-217ENST00000469223 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
HDAC6-217ENST00000469223 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 NPPCP23582 126 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 MEOX2P50222 304 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 CCL18P55774 89 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 CCL20P78556 96 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 SSX7Q7RTT5 188 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 SVBPQ8N300 66 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms