RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ADARB2-AS1A8MUL3 147 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 F8WDY8 70 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 TAX1BP3O14907 124 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 TSPOP30536 169 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 MIC13Q5XKP0 118 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 CYP2G1PQ6ZSU1 146 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 ZNF414Q96IQ9 312 aa5.27□□□□□ -1.57
SCAF4-204ENST00000467731 MRPL16Q9NX20 251 aaKnown RBP5.27□□□□□ -1.57
SCAF4-204ENST00000467731 PKD1L1Q8TDX9 2849 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 IGHV3OR16-8A0A075B7F1 116 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 YPEL3P61236 119 aaPredicted RBP5.26□□□□□ -1.57
SCAF4-204ENST00000467731 SPATA45Q537H7 98 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 STPG3Q8N7X2 389 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 PYGO2Q9BRQ0 406 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 NOTCH3Q9UM47 2321 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 C17orf112F2Z3M2 114 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 HSPB1P04792 205 aaKnown RBP5.26□□□□□ -1.57
SCAF4-204ENST00000467731 IL4P05112 153 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 LINC00869P0C866 280 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 FAM3BP58499 235 aaPredicted RBP5.26□□□□□ -1.57
SCAF4-204ENST00000467731 RPEL1Q2QD12 228 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 DPPA3Q6W0C5 159 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 NDUFA11Q86Y39 141 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 OR51G1Q8NGK1 321 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 PTH2Q96A98 100 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 PLA2G2EQ9NZK7 142 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 PXMP4Q9Y6I8 212 aa5.26□□□□□ -1.57
SCAF4-204ENST00000467731 LINC01619G3V211 115 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PRR20EP86478 221 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PRR20CP86479 221 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PRR20DP86480 221 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PRR20BP86481 221 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PRR20AP86496 221 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 UNQ9165/PRO28630Q6UXU0 137 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 C12orf54Q6X4T0 127 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 C3orf56Q8N813 242 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 NHLRC2Q8NBF2 726 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 GNPNAT1Q96EK6 184 aaPredicted RBP5.25□□□□□ -1.57
SCAF4-204ENST00000467731 MAP1LC3B2A6NCE7 125 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 GAGE10A6NGK3 116 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 CCL24O00175 119 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 CNN1P51911 297 aaKnown RBP5.25□□□□□ -1.57
SCAF4-204ENST00000467731 SLURP1P55000 103 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 LYZP61626 148 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PSG9Q00887 426 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 PNRC1Q12796 327 aaPredicted RBP5.25□□□□□ -1.57
SCAF4-204ENST00000467731 FHL3Q13643 280 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 OR2G3Q8NGZ4 309 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 TMEM37Q8WXS4 190 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 MAP1LC3BQ9GZQ8 125 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 ZFAND3Q9H8U3 227 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 SLC39A9Q9NUM3 307 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 TIMM9Q9Y5J7 89 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 NDUFA4O00483 81 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 ORM2P19652 201 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 AMTP48728 403 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 FFAR4Q5NUL3 377 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 Q6ZWC4 215 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 DEFB125Q8N687 156 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 GPR82Q96P67 336 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 MDFIQ99750 246 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 ZNF747Q9BV97 191 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 VSIRQ9H7M9 311 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 HSPB8Q9UJY1 196 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 ERG28Q9UKR5 140 aa5.25□□□□□ -1.57
SCAF4-204ENST00000467731 SEC11BP0C7V7 166 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 SYNJ2BPP57105 145 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 SERF2P84101 59 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 GPHB5Q86YW7 130 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 BLNKQ8WV28 456 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 UHRF2Q96PU4 802 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 SPATA25Q9BR10 227 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 KCNIP2Q9NS61 270 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 WI2-2373I1.2A0A1W2PRP0 233 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 RBFOX3A6NFN3 312 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 ZNF207O43670 478 aaKnown RBP5.24□□□□□ -1.57
SCAF4-204ENST00000467731 SRP19P09132 144 aaKnown RBP5.24□□□□□ -1.57
SCAF4-204ENST00000467731 FAM106AQ4KMX7 169 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 ACTL10Q5JWF8 245 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 UFSP1Q6NVU6 142 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 TMEM190Q8WZ59 177 aa5.24□□□□□ -1.57
SCAF4-204ENST00000467731 KLF5Q13887 457 aaPredicted RBP5.23□□□□□ -1.57
SCAF4-204ENST00000467731 SPATA31B1PQ5VZV4 182 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 CST9LP1Q5W188 147 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 PATE2Q6UY27 113 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 ERASQ7Z444 233 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 DLX4Q92988 240 aaPredicted RBP5.23□□□□□ -1.57
SCAF4-204ENST00000467731 B5MCH6 92 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 J3QR89 54 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 COX7A2P2O60397 106 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 EDN2P20800 178 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 FAM78BQ5VT40 261 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 CMTM2Q8TAZ6 248 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 RNF183Q96D59 192 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 RARRES2Q99969 163 aa5.23□□□□□ -1.57
SCAF4-204ENST00000467731 DAZ1Q9NQZ3 744 aaKnown RBP5.23□□□□□ -1.57
SCAF4-204ENST00000467731 IGHV3OR16-13A0A075B7E8 117 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms