RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
CGREF1-208ENST00000467539 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
CGREF1-208ENST00000467539 FRAS1Q86XX4 4008 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 KLLNB2CW77 178 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 OR7C2O60412 319 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 ATP5G1P05496 136 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 CRISP2P16562 243 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 ATP5G3P48201 142 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 TAS2R45P59539 299 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 RNF212Q495C1 297 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 VGLL1Q99990 258 aa12.79□□□□□ -0.36
CGREF1-208ENST00000467539 C7orf71A4D174 169 aa12.78□□□□□ -0.36
CGREF1-208ENST00000467539 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
CGREF1-208ENST00000467539 ACOT6Q3I5F7 207 aaPredicted RBP12.78□□□□□ -0.36
CGREF1-208ENST00000467539 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
CGREF1-208ENST00000467539 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
CGREF1-208ENST00000467539 PHYHIPLQ96FC7 376 aa12.78□□□□□ -0.36
CGREF1-208ENST00000467539 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
CGREF1-208ENST00000467539 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
CGREF1-208ENST00000467539 F5H768 121 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
CGREF1-208ENST00000467539 GPX1P07203 203 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 M6PRP20645 277 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
CGREF1-208ENST00000467539 CSN1S1P47710 185 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 CD300CQ08708 224 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 ASB13Q8WXK3 278 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
CGREF1-208ENST00000467539 TRBV7-9A0A0J9YWB2 115 aa12.76□□□□□ -0.37
CGREF1-208ENST00000467539 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
CGREF1-208ENST00000467539 DAZ2Q13117 558 aaKnown RBP12.76□□□□□ -0.37
CGREF1-208ENST00000467539 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
CGREF1-208ENST00000467539 Q9H3A6 140 aa12.76□□□□□ -0.37
CGREF1-208ENST00000467539 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 SNURFLB1AK76 121 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 GIPP09681 153 aaPredicted RBP12.75□□□□□ -0.37
CGREF1-208ENST00000467539 ZNF138P52744 262 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
CGREF1-208ENST00000467539 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 Q5BKY6 102 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
CGREF1-208ENST00000467539 BTN1A1Q13410 526 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 ZNF266Q14584 549 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 PQLC2Q6ZP29 291 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 UBE2DNLQ8IWF7 75 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
CGREF1-208ENST00000467539 OR10G4Q8NGN3 311 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
CGREF1-208ENST00000467539 LGALS9BQ3B8N2 356 aa12.73□□□□□ -0.37
CGREF1-208ENST00000467539 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
CGREF1-208ENST00000467539 OR2G3Q8NGZ4 309 aa12.73□□□□□ -0.37
CGREF1-208ENST00000467539 GAGE12BA1L429 117 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 PGPA6NDG6 321 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 EIF3GO75821 320 aaKnown RBP eCLIP12.72□□□□□ -0.37
CGREF1-208ENST00000467539 GAGE7O76087 117 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
CGREF1-208ENST00000467539 RAB2AP61019 212 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 ZNF680Q8NEM1 530 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 PSMG3Q9BT73 122 aaPredicted RBP12.72□□□□□ -0.37
CGREF1-208ENST00000467539 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
CGREF1-208ENST00000467539 SERF2P84101 59 aa12.71□□□□□ -0.37
CGREF1-208ENST00000467539 RGS21Q2M5E4 152 aa12.71□□□□□ -0.37
CGREF1-208ENST00000467539 FAM74A1Q5RGS3 127 aa12.71□□□□□ -0.37
CGREF1-208ENST00000467539 PRR9Q5T870 116 aa12.71□□□□□ -0.37
CGREF1-208ENST00000467539 HSD17B11Q8NBQ5 300 aa12.71□□□□□ -0.37
CGREF1-208ENST00000467539 INO80EQ8NBZ0 244 aaPredicted RBP12.71□□□□□ -0.37
CGREF1-208ENST00000467539 ATP6V0CP27449 155 aa12.7□□□□□ -0.38
CGREF1-208ENST00000467539 OR5I1Q13606 314 aa12.7□□□□□ -0.38
CGREF1-208ENST00000467539 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
CGREF1-208ENST00000467539 HYLS1Q96M11 299 aa12.7□□□□□ -0.38
CGREF1-208ENST00000467539 C18orf15Q96N68 181 aa12.7□□□□□ -0.38
CGREF1-208ENST00000467539 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 M0R2N4 97 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 RGS13O14921 159 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 NUDT3O95989 172 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 MBP02144 154 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 IBA57Q5T440 356 aaKnown RBP12.69□□□□□ -0.38
CGREF1-208ENST00000467539 Q6ZQT7 251 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 Q6ZR54 194 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 Q6ZTI0 123 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 Q8TAT8 98 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
CGREF1-208ENST00000467539 HMGB3O15347 200 aaKnown RBP12.68□□□□□ -0.38
CGREF1-208ENST00000467539 STAG3L2P0CL84 134 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 STAG3L3P0CL85 134 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 SUN5Q8TC36 379 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms