RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MORN2Q502X0 79 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 HAGHLQ6PII5 290 aaPredicted RBP1.43□□□□□ -2.18
SMC4-208ENST00000467468 Q6ZSA8 131 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 TCTE3Q8IZS6 198 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 OR5AK2Q8NH90 309 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 MAFIPQ8WZ33 124 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 NABP2Q9BQ15 211 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 MRPL57Q9BQC6 102 aaKnown RBP1.43□□□□□ -2.18
SMC4-208ENST00000467468 FKBP11Q9NYL4 201 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 GSKIPQ9P0R6 139 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 MED12LQ86YW9 2145 aa1.43□□□□□ -2.18
SMC4-208ENST00000467468 DSPPQ9NZW4 1301 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 PLXNA4Q9HCM2 1894 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 A0A1B0GW64 132 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 LOC107986453A0A1B0GWG9 222 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 OR2H2O95918 312 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 IGHV3-33P01772 117 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 PAEPP09466 180 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 CCL4P13236 92 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 LSM3P62310 102 aaKnown RBP1.42□□□□□ -2.18
SMC4-208ENST00000467468 GLIPR1L1Q6UWM5 242 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 LINC00322Q6ZN03 302 aaPredicted RBP1.42□□□□□ -2.18
SMC4-208ENST00000467468 FAM19A2Q8N3H0 131 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 OBSCN-AS1Q96MR7 158 aa1.42□□□□□ -2.18
SMC4-208ENST00000467468 XIRP1Q702N8 1843 aaKnown RBP1.42□□□□□ -2.18
SMC4-208ENST00000467468 FER1L6Q2WGJ9 1857 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 A0A096LPI6 279 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 MT-ND4LP03901 98 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
SMC4-208ENST00000467468 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
SMC4-208ENST00000467468 SLC25A4P12235 298 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 BLCAPP62952 87 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 PSPHP78330 225 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 SPRNQ5BIV9 151 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 TMEM244Q5VVB8 128 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 TMEM138Q9NPI0 162 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 TMEM14CQ9P0S9 112 aa1.41□□□□□ -2.18
SMC4-208ENST00000467468 SCN3AQ9NY46 2000 aa1.4□□□□□ -2.18
SMC4-208ENST00000467468 KIAA1549Q9HCM3 1950 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 DNAL4O96015 105 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 TCRAP04437 139 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 CKS1BP61024 79 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 QRFPP83859 136 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 ZCCHC23Q6ZST2 131 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 OR4S1Q8NGB4 309 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 LZICQ8WZA0 190 aa1.4□□□□□ -2.19
SMC4-208ENST00000467468 IGLV3-32A0A0A0MS00 114 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 C3orf85A0A1B0GTC6 90 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 ARPC4P59998 168 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 SMCO1Q147U7 214 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 ASB16-AS1Q495Z4 193 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 HSD17B12Q53GQ0 312 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 CASC2Q6XLA1 102 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 CIB3Q96Q77 187 aaPredicted RBP1.39□□□□□ -2.19
SMC4-208ENST00000467468 CALML5Q9NZT1 146 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 HSPB8Q9UJY1 196 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 MPC1Q9Y5U8 109 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 EXPH5Q8NEV8 1989 aa1.39□□□□□ -2.19
SMC4-208ENST00000467468 CEP152O94986 1710 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 ZNF727A8MUV8 499 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 KLF7O75840 302 aaPredicted RBP1.38□□□□□ -2.19
SMC4-208ENST00000467468 S100A12P80511 92 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 DEFB115Q30KQ5 88 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 MAGOHBQ96A72 148 aaKnown RBP1.38□□□□□ -2.19
SMC4-208ENST00000467468 ODF3Q96PU9 254 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 TNFSF18Q9UNG2 199 aa1.38□□□□□ -2.19
SMC4-208ENST00000467468 ETV6P41212 452 aa1.37□□□□□ -2.19
SMC4-208ENST00000467468 CCSMST1Q4G0I0 132 aa1.37□□□□□ -2.19
SMC4-208ENST00000467468 IZUMO2Q6UXV1 221 aa1.37□□□□□ -2.19
SMC4-208ENST00000467468 AP1S3Q96PC3 154 aa1.37□□□□□ -2.19
SMC4-208ENST00000467468 INTS1Q8N201 2190 aaKnown RBP1.37□□□□□ -2.19
SMC4-208ENST00000467468 LOC107984156A0A0G2JMH3 177 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 IFITM5A6NNB3 132 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 JMJD7-PLA2G4BH0Y9G9 81 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 SMIM24O75264 130 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 ARL14EPLP0DKL9 152 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 HIST1H1BP16401 226 aaKnown RBP1.36□□□□□ -2.19
SMC4-208ENST00000467468 DNAJB13P59910 316 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 TMEM91Q6ZNR0 172 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 ARL17AQ8IVW1 177 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 PLPP5Q8NEB5 264 aa1.36□□□□□ -2.19
SMC4-208ENST00000467468 PRRC2BQ5JSZ5 2229 aaKnown RBP1.36□□□□□ -2.19
SMC4-208ENST00000467468 COL1A1P02452 1464 aaPredicted RBP1.36□□□□□ -2.19
SMC4-208ENST00000467468 USP54Q70EL1 1684 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 ARFGEF3Q5TH69 2177 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 ERBINQ96RT1 1412 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 A0A0J9YY99 117 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 PPYP01298 95 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 CD14P08571 375 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 HLA-DRB4P13762 266 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 CKS2P33552 79 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 AKR1D1P51857 326 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 HIST1H1AQ02539 215 aaPredicted RBP1.35□□□□□ -2.19
SMC4-208ENST00000467468 SMIM21Q3B7S5 101 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 LINC00299Q6ZSB3 139 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 C5orf17Q8NAS9 161 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 OTOSQ8NHW6 89 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 BANF2Q9H503 90 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 METTL1Q9UBP6 276 aaKnown RBP1.35□□□□□ -2.19
SMC4-208ENST00000467468 HLA-DRB4X5D2U9 266 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms