RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 C18orf15Q96N68 181 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 TP53TG3Q9ULZ0 132 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 FAT1Q14517 4588 aa11.81□□□□□ -0.52
CYTH3-205ENST00000466543 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 IL15RAQ13261 267 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 RAB31Q13636 194 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 ZNF846Q147U1 533 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
CYTH3-205ENST00000466543 FUT9Q9Y231 359 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 TNFRSF18Q9Y5U5 241 aa11.8□□□□□ -0.52
CYTH3-205ENST00000466543 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
CYTH3-205ENST00000466543 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 LYRM1O43325 122 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 SPINK4O60575 86 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
CYTH3-205ENST00000466543 TCRBP04435 133 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 RNASE4P34096 147 aaKnown RBP11.79□□□□□ -0.52
CYTH3-205ENST00000466543 BAXQ07812 192 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 TMEM252Q8N6L7 170 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 ZFAND2AQ8N6M9 145 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 PFDN5Q99471 154 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 LINC00467Q9BRT7 94 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 LYRM2Q9NU23 88 aaPredicted RBP11.79□□□□□ -0.52
CYTH3-205ENST00000466543 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
CYTH3-205ENST00000466543 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
CYTH3-205ENST00000466543 SULT1A1P50225 295 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 TCL1AP56279 114 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 ANXA2RQ3ZCQ2 193 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 EIF4E3Q8N5X7 224 aaKnown RBP11.78□□□□□ -0.52
CYTH3-205ENST00000466543 ZNF680Q8NEM1 530 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 CHAC2Q8WUX2 184 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 BLNKQ8WV28 456 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 C2orf50Q96LR7 162 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 LINC00477Q96M19 166 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 VGLL1Q99990 258 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 NUDT15Q9NV35 164 aa11.78□□□□□ -0.52
CYTH3-205ENST00000466543 CRISP2P16562 243 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 FGF7P21781 194 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 S100A10P60903 97 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 RAB32Q13637 225 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 CNPY1Q3B7I2 92 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 FAM167A-AS1Q96KT0 104 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
CYTH3-205ENST00000466543 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
CYTH3-205ENST00000466543 SIVA1O15304 175 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 NXPH4O95158 308 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 S100A11P31949 105 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 ICAM4Q14773 271 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
CYTH3-205ENST00000466543 PRELID1Q9Y255 219 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
CYTH3-205ENST00000466543 MPDU1O75352 247 aa11.75□□□□□ -0.53
CYTH3-205ENST00000466543 PDE6HQ13956 83 aa11.75□□□□□ -0.53
CYTH3-205ENST00000466543 FAM122CQ6P4D5 195 aa11.75□□□□□ -0.53
CYTH3-205ENST00000466543 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
CYTH3-205ENST00000466543 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
CYTH3-205ENST00000466543 PAX4O43316 350 aa11.74□□□□□ -0.53
CYTH3-205ENST00000466543 GPX1P07203 203 aa11.74□□□□□ -0.53
CYTH3-205ENST00000466543 FHL2Q14192 279 aa11.74□□□□□ -0.53
CYTH3-205ENST00000466543 Q8TAT8 98 aa11.74□□□□□ -0.53
CYTH3-205ENST00000466543 NPCDR1Q9BY65 106 aa11.74□□□□□ -0.53
CYTH3-205ENST00000466543 VPS13BQ7Z7G8 4022 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
CYTH3-205ENST00000466543 CRYBA4P53673 196 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 NHLH2Q02577 135 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 IBA57Q5T440 356 aaKnown RBP11.73□□□□□ -0.53
CYTH3-205ENST00000466543 STX12Q86Y82 276 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 THAP6Q8TBB0 222 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 GPN1Q9HCN4 374 aaPredicted RBP11.73□□□□□ -0.53
CYTH3-205ENST00000466543 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
CYTH3-205ENST00000466543 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 RGS13O14921 159 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 PRAF2O60831 178 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 H2AFB2P0C5Z0 115 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 XGP55808 180 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 HBG1P69891 147 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 HBG2P69892 147 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
CYTH3-205ENST00000466543 NMBP08949 121 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 OR10J4P0C629 311 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 AAMDCQ9H7C9 122 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 PRO0255Q9UI72 69 aa11.71□□□□□ -0.53
CYTH3-205ENST00000466543 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
CYTH3-205ENST00000466543 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
CYTH3-205ENST00000466543 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
CYTH3-205ENST00000466543 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
CYTH3-205ENST00000466543 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
CYTH3-205ENST00000466543 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
CYTH3-205ENST00000466543 ZNF138P52744 262 aa11.69□□□□□ -0.54
CYTH3-205ENST00000466543 KRTAP10-1P60331 282 aa11.69□□□□□ -0.54
CYTH3-205ENST00000466543 MUC21Q5SSG8 566 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms