RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TRPT1Q86TN4 253 aaKnown RBP5.1□□□□□ -1.59
CLDN4-204ENST00000466411 TMEM256Q8N2U0 113 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 C9orf62Q8N4C0 152 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 TMED6Q8WW62 240 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 RPUSD4Q96CM3 377 aaKnown RBP5.1□□□□□ -1.59
CLDN4-204ENST00000466411 FXYD5Q96DB9 178 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 SAT2Q96F10 170 aaPredicted RBP5.1□□□□□ -1.59
CLDN4-204ENST00000466411 FAM167A-AS1Q96KT0 104 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 C20orf144Q9BQM9 153 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 SH3BGRL3Q9H299 93 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 OTORQ9NRC9 128 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 UBQLN2Q9UHD9 624 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 LENEPQ9Y5L5 61 aa5.1□□□□□ -1.59
CLDN4-204ENST00000466411 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 MAP1LC3B2A6NCE7 125 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 A8MTW9 85 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 F6UZH7 168 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 H3BMM0 161 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 IFNA1P01562 189 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 FHITP49789 147 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 HAGHQ16775 308 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 APRG1Q8IVJ8 170 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 C5orf17Q8NAS9 161 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 OR8A1Q8NGG7 326 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 IL17DQ8TAD2 202 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 BLNKQ8WV28 456 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 LINC00477Q96M19 166 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 MAP1LC3BQ9GZQ8 125 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 MANBALQ9NQG1 85 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 ZNF586Q9NXT0 402 aa5.09□□□□□ -1.59
CLDN4-204ENST00000466411 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
CLDN4-204ENST00000466411 TRAV1-1A0A0B4J248 108 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 TRAV5A0A0B4J249 113 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 TEX48A0A1B0GUV7 120 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 TMEM189A5PLL7 270 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 SMIM9A6NGZ8 99 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 NPIPB6E9PJ23 425 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 H3BQ15 152 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 BOLA2-SMG1P6H3BVE0 249 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 CA1P00915 261 aaPredicted RBP5.08□□□□□ -1.6
CLDN4-204ENST00000466411 INSP01308 110 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 OR10J4P0C629 311 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 PYYP10082 97 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 GCHFRP30047 84 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 LEPP41159 167 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 SULT1A2P50226 295 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 BLOC1S1P78537 153 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 HIST1H1AQ02539 215 aaPredicted RBP5.08□□□□□ -1.6
CLDN4-204ENST00000466411 MORN5Q5VZ52 161 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 FAM24BQ8N5W8 94 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 OR4B1Q8NGF8 309 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 FAM213BQ8TBF2 198 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 MBD3L1Q8WWY6 194 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 HIST1H2BAQ96A08 127 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 NDFIP1Q9BT67 221 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 Q9H3A6 140 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 GOLT1BQ9Y3E0 138 aa5.08□□□□□ -1.6
CLDN4-204ENST00000466411 DNAH17Q9UFH2 4485 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 TRAV8-2A0A0B4J237 113 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 A0A1B0GVG6 124 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 SLC17A3O00476 420 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 SPRY2O43597 315 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 NDUFB4O95168 129 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 LY6G6CO95867 125 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 IFNA7P01567 189 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 S100A9P06702 114 aaKnown RBP5.07□□□□□ -1.6
CLDN4-204ENST00000466411 MIFP14174 115 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 CDKN1BP46527 198 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 CNN1P51911 297 aaKnown RBP5.07□□□□□ -1.6
CLDN4-204ENST00000466411 RANP62826 216 aaKnown RBP5.07□□□□□ -1.6
CLDN4-204ENST00000466411 PMS2P11Q13670 270 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 ICAM4Q14773 271 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 C9orf47Q6ZRZ4 202 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 IQCF2Q8IXL9 164 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 RNF182Q8N6D2 247 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 RNF183Q96D59 192 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 WFDC10AQ9H1F0 79 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 SELENOKQ9Y6D0 94 aa5.07□□□□□ -1.6
CLDN4-204ENST00000466411 NDUFS6O75380 124 aaKnown RBP5.06□□□□□ -1.6
CLDN4-204ENST00000466411 RPL35AP18077 110 aaKnown RBP5.06□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF138P52744 262 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 CYB561D1Q8N8Q1 229 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 NUDT10Q8NFP7 164 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 NUDT11Q96G61 164 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 IGF2BP2-AS1Q96M15 143 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 NEU1Q99519 415 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 NIPSNAP3BQ9BS92 247 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 TMEM208Q9BTX3 173 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 C11orf68Q9H3H3 251 aaKnown RBP5.06□□□□□ -1.6
CLDN4-204ENST00000466411 PKD1P98161 4303 aa5.06□□□□□ -1.6
CLDN4-204ENST00000466411 PGPA6NDG6 321 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 KNCNA6PVL3 124 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF705EA8MWA4 302 aaPredicted RBP5.05□□□□□ -1.6
CLDN4-204ENST00000466411 DIRC3C9JPN6 131 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 H7BYZ3 331 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms