RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 FGF7P21781 194 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 PPT1P50897 306 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 RND2P52198 227 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 ACOT6Q3I5F7 207 aaPredicted RBP10.06□□□□□ -0.8
CXCR4-203ENST00000466288 Q5VSD8 79 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 SSX7Q7RTT5 188 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
CXCR4-203ENST00000466288 RBFOX3A6NFN3 312 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 F5H768 121 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 F6UB75 175 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 SFTA3P0C7M3 94 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 FHITP49789 147 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 ZNF506Q5JVG8 444 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 FAM78BQ5VT40 261 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 NPCDR1Q9BY65 106 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 NKX6-2Q9C056 277 aaPredicted RBP10.05□□□□□ -0.8
CXCR4-203ENST00000466288 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
CXCR4-203ENST00000466288 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 TOMM40O96008 361 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 DEFB130BP0DP73 79 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 DEFB130AP0DP74 79 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 GPX4P36969 197 aaPredicted RBP10.04□□□□□ -0.8
CXCR4-203ENST00000466288 PSMB3P49720 205 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 ACTR3CQ9C0K3 210 aaPredicted RBP10.04□□□□□ -0.8
CXCR4-203ENST00000466288 Q9H3A6 140 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 AGPAT2O15120 278 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 ID1P41134 155 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
CXCR4-203ENST00000466288 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
CXCR4-203ENST00000466288 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
CXCR4-203ENST00000466288 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
CXCR4-203ENST00000466288 A0A0J9YX75 114 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 A8MTW9 85 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 ZNF705GA8MUZ8 300 aaPredicted RBP10.03□□□□□ -0.8
CXCR4-203ENST00000466288 PSG1P11464 419 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 TEPPQ6URK8 271 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 AMTNQ6UX39 209 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 TMEM208Q9BTX3 173 aa10.03□□□□□ -0.8
CXCR4-203ENST00000466288 ATP5G1P05496 136 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 ADCYAP1P18509 176 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
CXCR4-203ENST00000466288 ATP5G3P48201 142 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 AKR1C1Q04828 323 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 EBLN2Q6P2I7 272 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 TMEM170AQ8WVE7 144 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 NPIPB3Q92617 1050 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 FRZBQ92765 325 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
CXCR4-203ENST00000466288 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 TSPOP30536 169 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
CXCR4-203ENST00000466288 ETFRF1Q6IPR1 90 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
CXCR4-203ENST00000466288 A0A1W2PPQ1 181 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 CBY3A6NI87 242 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 ISLRO14498 428 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 CRXO43186 299 aaPredicted RBP10□□□□□ -0.81
CXCR4-203ENST00000466288 BCL2P10415 239 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 BTN1A1Q13410 526 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
CXCR4-203ENST00000466288 CLRN3Q8NCR9 226 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 ACY3Q96HD9 319 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 SLC35E1Q96K37 410 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 C20orf173Q96LM9 149 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 UHRF2Q96PU4 802 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 UPK3BQ9BT76 320 aa10□□□□□ -0.81
CXCR4-203ENST00000466288 SMCO3A2RU48 225 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
CXCR4-203ENST00000466288 AZU1P20160 251 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 CCL20P78556 96 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 RHEBQ15382 184 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 DOK5Q9P104 306 aa9.99□□□□□ -0.81
CXCR4-203ENST00000466288 A0A1W2PPV4 95 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 C9JQL5 133 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 TMEM250H0YL14 139 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 SCO1O75880 301 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 CDC34P49427 236 aaPredicted RBP9.98□□□□□ -0.81
CXCR4-203ENST00000466288 ICAM4Q14773 271 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 FAM74A3Q4VXF1 159 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 C1orf194Q5T5A4 169 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 LCN15Q6UWW0 184 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 MGST2Q99735 147 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms