RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ZNF345Q14585 488 aa18.52■□□□□ 0.56
SMC4-206ENST00000465903 SSX7Q7RTT5 188 aa18.52■□□□□ 0.56
SMC4-206ENST00000465903 C20orf144Q9BQM9 153 aa18.52■□□□□ 0.56
SMC4-206ENST00000465903 DKK2Q9UBU2 259 aa18.52■□□□□ 0.56
SMC4-206ENST00000465903 YTHDF2Q9Y5A9 579 aaKnown RBP18.52■□□□□ 0.56
SMC4-206ENST00000465903 J3KRW8 73 aa18.51■□□□□ 0.55
SMC4-206ENST00000465903 ARL14EPLP0DKL9 152 aa18.51■□□□□ 0.55
SMC4-206ENST00000465903 ST6GAL2Q96JF0 529 aa18.51■□□□□ 0.55
SMC4-206ENST00000465903 RYR2Q92736 4967 aa18.51■□□□□ 0.55
SMC4-206ENST00000465903 SPART-AS1P0CW21 52 aa18.5■□□□□ 0.55
SMC4-206ENST00000465903 FAM222AQ5U5X8 452 aa18.5■□□□□ 0.55
SMC4-206ENST00000465903 SUN5Q8TC36 379 aa18.5■□□□□ 0.55
SMC4-206ENST00000465903 ACTR3CQ9C0K3 210 aaPredicted RBP18.5■□□□□ 0.55
SMC4-206ENST00000465903 OTORQ9NRC9 128 aa18.5■□□□□ 0.55
SMC4-206ENST00000465903 PLA2G2EQ9NZK7 142 aa18.5■□□□□ 0.55
SMC4-206ENST00000465903 PLAC8L1A1L4L8 177 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 PGPA6NDG6 321 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 C11orf94C9JXX5 98 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 TAS2R60P59551 318 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 ARPC5LQ9BPX5 153 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 ZNF492Q9P255 531 aa18.49■□□□□ 0.55
SMC4-206ENST00000465903 KLLNB2CW77 178 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 DIRC3C9JPN6 131 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 H7BYZ3 331 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 CRISP2P16562 243 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 CSN1S1P47710 185 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 ZNF726P1Q15940 193 aa18.48■□□□□ 0.55
SMC4-206ENST00000465903 TRAV10A0A0B4J240 114 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 TRAV12-3A0A0B4J271 114 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 RBAKDNA6NC62 111 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 SLC25A5P05141 298 aaKnown RBP18.47■□□□□ 0.55
SMC4-206ENST00000465903 GCHFRP30047 84 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 TMEM78Q5T7P6 136 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 C2CD4CQ8TF44 421 aa18.47■□□□□ 0.55
SMC4-206ENST00000465903 A0A0D9SG52 128 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 HTN1P15515 57 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 CD300CQ08708 224 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 ZFAND2AQ8N6M9 145 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 RXFP4Q8TDU9 374 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 HYLS1Q96M11 299 aa18.46■□□□□ 0.55
SMC4-206ENST00000465903 C7orf71A4D174 169 aa18.45■□□□□ 0.54
SMC4-206ENST00000465903 NIPSNAP3BQ9BS92 247 aa18.45■□□□□ 0.54
SMC4-206ENST00000465903 ZNF324O75467 553 aaPredicted RBP18.44■□□□□ 0.54
SMC4-206ENST00000465903 CXorf1O96002 111 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 NMBP08949 121 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 ZNF138P52744 262 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 BTN1A1Q13410 526 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 PRR9Q5T870 116 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 ARL6IP6Q8N6S5 226 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 Q8TAT8 98 aa18.44■□□□□ 0.54
SMC4-206ENST00000465903 CTXND1A0A1B0GTU2 59 aa18.43■□□□□ 0.54
SMC4-206ENST00000465903 TEX48A0A1B0GUV7 120 aa18.43■□□□□ 0.54
SMC4-206ENST00000465903 AKR1C8PQ5T2L2 129 aa18.43■□□□□ 0.54
SMC4-206ENST00000465903 RNASE8Q8TDE3 154 aaKnown RBP18.43■□□□□ 0.54
SMC4-206ENST00000465903 HYDINQ4G0P3 5121 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 DEFB131BA0A096LNP1 70 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 BCL2L11O43521 198 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 FAM74A1Q5RGS3 127 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 TCTE3Q8IZS6 198 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 CMTM2Q8TAZ6 248 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 C16orf74Q96GX8 76 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 TMEM167BQ9NRX6 74 aa18.42■□□□□ 0.54
SMC4-206ENST00000465903 TRBV7-9A0A0J9YWB2 115 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 IGLL5B9A064 214 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 GPX1P07203 203 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 RNASE4P34096 147 aaKnown RBP18.41■□□□□ 0.54
SMC4-206ENST00000465903 ZNF493Q6ZR52 646 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 TMUB2Q71RG4 321 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 TMEM263Q8WUH6 116 aaKnown RBP18.41■□□□□ 0.54
SMC4-206ENST00000465903 LINC00476Q8WZB0 136 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 APLNQ9ULZ1 77 aa18.41■□□□□ 0.54
SMC4-206ENST00000465903 KANTRA0A1W2PQU2 76 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 LYRM9A8MSI8 78 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 GNG5P63218 68 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 Q6ZQT7 251 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 PYGO2Q9BRQ0 406 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 RPH3ALQ9UNE2 315 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 VPS13DQ5THJ4 4388 aa18.4■□□□□ 0.54
SMC4-206ENST00000465903 TMED6Q8WW62 240 aa18.39■□□□□ 0.53
SMC4-206ENST00000465903 ZNF471Q9BX82 626 aaPredicted RBP18.39■□□□□ 0.53
SMC4-206ENST00000465903 TMPRSS5Q9H3S3 457 aa18.39■□□□□ 0.53
SMC4-206ENST00000465903 SEC11BP0C7V7 166 aa18.38■□□□□ 0.53
SMC4-206ENST00000465903 FGF8P55075 233 aaPredicted RBP18.38■□□□□ 0.53
SMC4-206ENST00000465903 DAD1P61803 113 aa18.38■□□□□ 0.53
SMC4-206ENST00000465903 GOLT1AQ6ZVE7 132 aa18.38■□□□□ 0.53
SMC4-206ENST00000465903 CCDC28AQ8IWP9 274 aa18.38■□□□□ 0.53
SMC4-206ENST00000465903 LENEPQ9Y5L5 61 aa18.38■□□□□ 0.53
SMC4-206ENST00000465903 TCTAP57738 103 aa18.37■□□□□ 0.53
SMC4-206ENST00000465903 SUMO1P63165 101 aaKnown RBP18.37■□□□□ 0.53
SMC4-206ENST00000465903 LGALSLQ3ZCW2 172 aaPredicted RBP18.37■□□□□ 0.53
SMC4-206ENST00000465903 LINC00467Q9BRT7 94 aa18.37■□□□□ 0.53
SMC4-206ENST00000465903 IGHV4-4A0A075B6R2 117 aa18.36■□□□□ 0.53
SMC4-206ENST00000465903 GGTLC3B5MD39 225 aa18.36■□□□□ 0.53
SMC4-206ENST00000465903 FHITP49789 147 aa18.36■□□□□ 0.53
SMC4-206ENST00000465903 C5orf17Q8NAS9 161 aa18.36■□□□□ 0.53
SMC4-206ENST00000465903 NOP10Q9NPE3 64 aaKnown RBP18.36■□□□□ 0.53
SMC4-206ENST00000465903 TIMM8BQ9Y5J9 83 aaPredicted RBP18.36■□□□□ 0.53
SMC4-206ENST00000465903 hCG_2014768A0A024R1R8 64 aa18.35■□□□□ 0.53
SMC4-206ENST00000465903 TRAV8-1A0A0A6YYK1 113 aa18.35■□□□□ 0.53
SMC4-206ENST00000465903 A0A1W2PRE2 83 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms