RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TCEAL7Q9BRU2 100 aa12.77□□□□□ -0.37
PTPRU-206ENST00000465525 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
PTPRU-206ENST00000465525 A0A0J9YX75 114 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 K7EQM0 130 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 EBLN2Q6P2I7 272 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 PRNTQ86SH4 94 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 SAV1Q9H4B6 383 aaPredicted RBP12.76□□□□□ -0.37
PTPRU-206ENST00000465525 C19orf73Q9NVV2 129 aa12.76□□□□□ -0.37
PTPRU-206ENST00000465525 UBE2G1P62253 170 aa12.75□□□□□ -0.37
PTPRU-206ENST00000465525 SOHLH1Q5JUK2 328 aa12.75□□□□□ -0.37
PTPRU-206ENST00000465525 KPRPQ5T749 579 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-206ENST00000465525 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
PTPRU-206ENST00000465525 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
PTPRU-206ENST00000465525 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
PTPRU-206ENST00000465525 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 PGPEP1LA6NFU8 196 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 ADCYAP1P18509 176 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 CMC4P56277 68 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-206ENST00000465525 FLI1Q01543 452 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-206ENST00000465525 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 Q86TA4 180 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 ARL6IP6Q8N6S5 226 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 TMEM75Q8N9X5 138 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-206ENST00000465525 PSG8Q9UQ74 426 aa12.74□□□□□ -0.37
PTPRU-206ENST00000465525 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 ZNF727A8MUV8 499 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 SNAPINO95295 136 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 TMEM183BQ1AE95 376 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 CENPWQ5EE01 88 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 TMEM78Q5T7P6 136 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 FMC1Q96HJ9 113 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 KLF12Q9Y4X4 402 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 CT45A10P0DMU9 189 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 TVP23CQ96ET8 276 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
PTPRU-206ENST00000465525 H3BMM0 161 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
PTPRU-206ENST00000465525 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 ZNF138P52744 262 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 FAM110AQ9BQ89 295 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
PTPRU-206ENST00000465525 NOTCH1P46531 2555 aa12.71□□□□□ -0.37
PTPRU-206ENST00000465525 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
PTPRU-206ENST00000465525 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
PTPRU-206ENST00000465525 J3KRW8 73 aa12.71□□□□□ -0.37
PTPRU-206ENST00000465525 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
PTPRU-206ENST00000465525 GNG4P50150 75 aa12.71□□□□□ -0.37
PTPRU-206ENST00000465525 FXYD7P58549 80 aa12.71□□□□□ -0.37
PTPRU-206ENST00000465525 Q8N1Y9 231 aa12.71□□□□□ -0.37
PTPRU-206ENST00000465525 BAGE2Q86Y30 109 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
PTPRU-206ENST00000465525 LTAP01374 205 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 PRB2P02812 416 aaPredicted RBP12.7□□□□□ -0.38
PTPRU-206ENST00000465525 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
PTPRU-206ENST00000465525 TAS2R60P59551 318 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 STHQ8IWL8 128 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 PPP1R14DQ9NXH3 145 aa12.7□□□□□ -0.38
PTPRU-206ENST00000465525 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
PTPRU-206ENST00000465525 S100A9P06702 114 aaKnown RBP12.69□□□□□ -0.38
PTPRU-206ENST00000465525 KIR3DS1Q14943 382 aa12.69□□□□□ -0.38
PTPRU-206ENST00000465525 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
PTPRU-206ENST00000465525 SRD5A3Q9H8P0 318 aa12.69□□□□□ -0.38
PTPRU-206ENST00000465525 M0R2Z0 102 aa12.68□□□□□ -0.38
PTPRU-206ENST00000465525 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
PTPRU-206ENST00000465525 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
PTPRU-206ENST00000465525 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
PTPRU-206ENST00000465525 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.68□□□□□ -0.38
PTPRU-206ENST00000465525 OCC1Q8TAD7 63 aa12.68□□□□□ -0.38
PTPRU-206ENST00000465525 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 TMEM241Q24JQ0 296 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 FAM74A3Q4VXF1 159 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 PRR9Q5T870 116 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
PTPRU-206ENST00000465525 ZC2HC1AQ96GY0 325 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 C9JCJ5 164 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 K7EN84 100 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 OR5I1Q13606 314 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 NDFIP1Q9BT67 221 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
PTPRU-206ENST00000465525 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
PTPRU-206ENST00000465525 ADIRFQ15847 76 aa12.66□□□□□ -0.38
PTPRU-206ENST00000465525 Q6ZQT7 251 aa12.66□□□□□ -0.38
PTPRU-206ENST00000465525 TMEM183AQ8IXX5 376 aa12.66□□□□□ -0.38
PTPRU-206ENST00000465525 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms