RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
HDAC6-215ENST00000465457 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 SORL1Q92673 2214 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 H3BTX0 84 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 COX19Q49B96 90 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 RNF152Q8N8N0 203 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
HDAC6-215ENST00000465457 KLK15Q9H2R5 256 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 RPH3ALQ9UNE2 315 aa10.48□□□□□ -0.73
HDAC6-215ENST00000465457 IGHV3-35A0A0C4DH35 117 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 LOC105371267A0A1B0GV96 52 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 A0A1W2PPQ1 181 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 ZNF785A8K8V0 405 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 DIRC3C9JPN6 131 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 K7EMT4 169 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 PSG3Q16557 428 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 CT83Q5H943 113 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 GOLT1AQ6ZVE7 132 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 TMEM183AQ8IXX5 376 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 MYOZ3Q8TDC0 251 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-215ENST00000465457 V9GYV3 84 aa10.47□□□□□ -0.73
HDAC6-215ENST00000465457 SLC17A3O00476 420 aa10.46□□□□□ -0.73
HDAC6-215ENST00000465457 SNRPCP09234 159 aaKnown RBP10.46□□□□□ -0.73
HDAC6-215ENST00000465457 C16orf54Q6UWD8 224 aa10.46□□□□□ -0.73
HDAC6-215ENST00000465457 GPHB5Q86YW7 130 aa10.46□□□□□ -0.73
HDAC6-215ENST00000465457 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.73
HDAC6-215ENST00000465457 MCRIP2Q9BUT9 160 aaKnown RBP10.46□□□□□ -0.73
HDAC6-215ENST00000465457 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
HDAC6-215ENST00000465457 UFC1Q9Y3C8 167 aa10.46□□□□□ -0.73
HDAC6-215ENST00000465457 RYR1P21817 5038 aa10.46□□□□□ -0.74
HDAC6-215ENST00000465457 TRAV34A0A0B4J273 112 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
HDAC6-215ENST00000465457 IGHV3-11P01762 117 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 S100A6P06703 90 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 LGALS1P09382 135 aaKnown RBP10.45□□□□□ -0.74
HDAC6-215ENST00000465457 OR5I1Q13606 314 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 OR4B1Q8NGF8 309 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 GLMPQ8WWB7 406 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
HDAC6-215ENST00000465457 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 SMAD5-AS1Q9Y6J3 95 aa10.45□□□□□ -0.74
HDAC6-215ENST00000465457 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-215ENST00000465457 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
HDAC6-215ENST00000465457 DEFB136Q30KP8 78 aa10.44□□□□□ -0.74
HDAC6-215ENST00000465457 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
HDAC6-215ENST00000465457 KLHL30-AS1Q8NEE0 82 aa10.44□□□□□ -0.74
HDAC6-215ENST00000465457 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
HDAC6-215ENST00000465457 PSG8Q9UQ74 426 aa10.44□□□□□ -0.74
HDAC6-215ENST00000465457 IGHV3OR16-8A0A075B7F1 116 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 IGHV7-4-1A0A0J9YVY3 117 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 TRBV12-3P01733 135 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 COX8CQ7Z4L0 72 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 GBGT1Q8N5D6 347 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 NDFIP1Q9BT67 221 aa10.43□□□□□ -0.74
HDAC6-215ENST00000465457 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
HDAC6-215ENST00000465457 ZNF320A2RRD8 509 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 C19orf71A6NCJ1 209 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 A8MWL6 223 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 CHEK1O14757 476 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 P01737 135 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 MT-ND6P03923 174 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 WDR73Q6P4I2 378 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 RASL11AQ6T310 242 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 UNQ9165/PRO28630Q6UXU0 137 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 NHLRC2Q8NBF2 726 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 NUDT10Q8NFP7 164 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 TSKUQ8WUA8 353 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 NUDT11Q96G61 164 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
HDAC6-215ENST00000465457 A8MWP6 167 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 M0R3E3 92 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 LGALS9O00182 355 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 TRGC2P03986 189 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 RPLP1P05386 114 aaKnown RBP10.41□□□□□ -0.74
HDAC6-215ENST00000465457 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 PRR27Q6MZM9 219 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 ZFP82Q8N141 532 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 SAV1Q9H4B6 383 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-215ENST00000465457 NAT8BQ9UHF3 227 aa10.41□□□□□ -0.74
HDAC6-215ENST00000465457 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
HDAC6-215ENST00000465457 NPIPB6E9PJ23 425 aa10.4□□□□□ -0.74
HDAC6-215ENST00000465457 ZNF207O43670 478 aaKnown RBP10.4□□□□□ -0.74
HDAC6-215ENST00000465457 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-215ENST00000465457 CDX1P47902 265 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms