RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
SHQ1-203ENST00000463369 PRNDQ9UKY0 176 aa6.87□□□□□ -1.31
SHQ1-203ENST00000463369 ARFGEF3Q5TH69 2177 aa6.87□□□□□ -1.31
SHQ1-203ENST00000463369 E9PLD3 99 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 FAM106CPP0CH98 169 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 NMUP48645 174 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 FXYD2P54710 66 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 CACNG7P62955 275 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 POU2AF1Q16633 256 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 FAM106AQ4KMX7 169 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 SH2D6Q7Z4S9 175 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 PDPNQ86YL7 162 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 GATD1Q8NB37 220 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 OR1L8Q8NGR8 309 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
SHQ1-203ENST00000463369 IQCF6A8MYZ5 107 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 IGHV3-13P01766 116 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 IGF1P05019 195 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 RNASE2P10153 161 aaKnown RBP6.86□□□□□ -1.31
SHQ1-203ENST00000463369 IFI27P40305 119 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-203ENST00000463369 BSPH1Q075Z2 132 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 FLNCQ14315 2725 aa6.86□□□□□ -1.31
SHQ1-203ENST00000463369 UBR5O95071 2799 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ANKHD1Q8IWZ3 2542 aaKnown RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 RAI1Q7Z5J4 1906 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 A0A1B0GUT8 65 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 UPK2O00526 184 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 GLRXP35754 106 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 LOXL1Q08397 574 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ZNF415Q09FC8 603 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 EDDM3AQ14507 147 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 SLC25A48Q6ZT89 311 aaKnown RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 APRG1Q8IVJ8 170 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ABCA4P78363 2273 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 TNCP24821 2201 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ROS1P08922 2347 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 DYSFO75923 2080 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 K7ERJ3 54 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 COL8A1P27658 744 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 RIGQ13278 110 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 NUP37Q8NFH4 326 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 KLF14Q8TD94 323 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ARPC1AQ92747 370 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 RETNQ9HD89 108 aa6.85□□□□□ -1.31
SHQ1-203ENST00000463369 DSCAMO60469 2012 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 OR11H12B2RN74 326 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 IGLL5B9A064 214 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 PSMG4Q5JS54 123 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 OR11H1Q8NG94 326 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 OR11H2Q8NH07 326 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 ZNF502Q8TBZ5 544 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 TM2D2Q9BX73 214 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 TANC2Q9HCD6 1990 aa6.84□□□□□ -1.31
SHQ1-203ENST00000463369 MYO18BQ8IUG5 2567 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 H3BMG7 143 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 C19orf84I3L1E1 186 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 CNIH1O95406 144 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 TCRAP04437 139 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 MPV17P39210 176 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 INSL3P51460 131 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 RNF183Q96D59 192 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 CXXC4Q9H2H0 198 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 USP9XQ93008 2570 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 LRBAP50851 2863 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 PKDREJQ9NTG1 2253 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 SHISA9B4DS77 424 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 H3BTX0 84 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 LOXP28300 417 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 PAX8Q06710 450 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 CEND1Q8N111 149 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 IFI27L1Q96BM0 104 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 FLYWCH2Q96CP2 140 aaKnown RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
SHQ1-203ENST00000463369 PRO0461Q9UI25 63 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 LINC00312Q9Y6C7 94 aa6.83□□□□□ -1.32
SHQ1-203ENST00000463369 DOPEY1Q5JWR5 2465 aa6.82□□□□□ -1.32
SHQ1-203ENST00000463369 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-203ENST00000463369 IGLV3-9A0A075B6K5 115 aa6.82□□□□□ -1.32
SHQ1-203ENST00000463369 IGKV1D-37A0A075B6S9 117 aa6.82□□□□□ -1.32
SHQ1-203ENST00000463369 PLAUP00749 431 aa6.82□□□□□ -1.32
SHQ1-203ENST00000463369 HBDP02042 147 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms