RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 HYLS1Q96M11 299 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 LYSTQ99698 3801 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 TRAV12-3A0A0B4J271 114 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 LCE6AA0A183 80 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 H7BYZ3 331 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 CXorf1O96002 111 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 PRM2P04554 102 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 SLC25A5P05141 298 aaKnown RBP7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 GCHFRP30047 84 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 C12orf74Q32Q52 190 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 FAM222AQ5U5X8 452 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 Q6ZNX1 250 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 Q6ZTC4 211 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 IQCF2Q8IXL9 164 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 OR11H4Q8NGC9 324 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 C2CD4CQ8TF44 421 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 VGLL1Q99990 258 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 TMEM167BQ9NRX6 74 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 DKK2Q9UBU2 259 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
TRAPPC12-213ENST00000461577 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 C7orf71A4D174 169 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 RBAKDNA6NC62 111 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 DIRC3C9JPN6 131 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 PFDN1O60925 122 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 GPX1P07203 203 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 AZU1P20160 251 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF138P52744 262 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 CCDC28AQ8IWP9 274 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 C16orf74Q96GX8 76 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF471Q9BX82 626 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
TRAPPC12-213ENST00000461577 hCG_2014768A0A024R1R8 64 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 DEFB131BA0A096LNP1 70 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 IGLL5B9A064 214 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 BCL2L11O43521 198 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 CRISP2P16562 243 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 DAD1P61803 113 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 BTN1A1Q13410 526 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF493Q6ZR52 646 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 TMUB2Q71RG4 321 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 ST6GAL2Q96JF0 529 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 FAM19A4Q96LR4 140 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 ALMS1Q8TCU4 4167 aa7.57□□□□□ -1.2
TRAPPC12-213ENST00000461577 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 LYRM9A8MSI8 78 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 KLLNB2CW77 178 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 NMBP08949 121 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 CD300CQ08708 224 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF726P1Q15940 193 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 GOLT1AQ6ZVE7 132 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 SSX7Q7RTT5 188 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 TCTE3Q8IZS6 198 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 ARL6IP6Q8N6S5 226 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 Q8TAT8 98 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 PYGO2Q9BRQ0 406 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 PLECQ15149 4684 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-213ENST00000461577 TRBV7-9A0A0J9YWB2 115 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 K7EQM0 130 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 LY6G6CO95867 125 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 HTN3P15516 51 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 FGF8P55075 233 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 TCTAP57738 103 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 GNG5P63218 68 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 STOML3Q8TAV4 291 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 TIMM8BQ9Y5J9 83 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 LENEPQ9Y5L5 61 aa7.55□□□□□ -1.2
TRAPPC12-213ENST00000461577 SERTM2A0A1B0GWG4 89 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 MAP1LC3B2A6NCE7 125 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 CBY3A6NI87 242 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 RGS13O14921 159 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 ZNF324O75467 553 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 PRR9Q5T870 116 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 AKAP14Q86UN6 197 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 EIF4E3Q8N5X7 224 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 RNASE8Q8TDE3 154 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 TMED6Q8WW62 240 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 MAP1LC3BQ9GZQ8 125 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 TMPRSS5Q9H3S3 457 aa7.54□□□□□ -1.2
TRAPPC12-213ENST00000461577 NOP10Q9NPE3 64 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms