RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LINC00477Q96M19 166 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 Q9H3A6 140 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 BORCS7-ASMTA0A0B4J1R7 106 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 HMGB3O15347 200 aaKnown RBP10.95□□□□□ -0.66
VARS-219ENST00000461328 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 ATP6V0CP27449 155 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 CDC34P49427 236 aaPredicted RBP10.95□□□□□ -0.66
VARS-219ENST00000461328 PQLC2Q6ZP29 291 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 TMEM263Q8WUH6 116 aaKnown RBP10.95□□□□□ -0.66
VARS-219ENST00000461328 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
VARS-219ENST00000461328 C7orf71A4D174 169 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 RNF222A6NCQ9 220 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 SLC25A5P05141 298 aaKnown RBP10.94□□□□□ -0.66
VARS-219ENST00000461328 ZNF493Q6ZR52 646 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 LYPD1Q8N2G4 141 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 OR2G3Q8NGZ4 309 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 HYLS1Q96M11 299 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 VGLL1Q99990 258 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
VARS-219ENST00000461328 RPH3ALQ9UNE2 315 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
VARS-219ENST00000461328 EPPK1P58107 5090 aaKnown RBP10.94□□□□□ -0.66
VARS-219ENST00000461328 MBP02144 154 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 GPX1P07203 203 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 BTN1A1Q13410 526 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 CMTM2Q8TAZ6 248 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
VARS-219ENST00000461328 TIMM8BQ9Y5J9 83 aaPredicted RBP10.93□□□□□ -0.66
VARS-219ENST00000461328 PLAC8L1A1L4L8 177 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 ARPC5O15511 151 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
VARS-219ENST00000461328 ZNF138P52744 262 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
VARS-219ENST00000461328 Q8TAT8 98 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 RNASE8Q8TDE3 154 aaKnown RBP10.92□□□□□ -0.66
VARS-219ENST00000461328 GNPNAT1Q96EK6 184 aaPredicted RBP10.92□□□□□ -0.66
VARS-219ENST00000461328 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 NOP10Q9NPE3 64 aaKnown RBP10.92□□□□□ -0.66
VARS-219ENST00000461328 OTORQ9NRC9 128 aa10.92□□□□□ -0.66
VARS-219ENST00000461328 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 KLLNB2CW77 178 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 P0DMU3 169 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 FAM231AP0DMU4 169 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 FAM231CP0DMU5 169 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 SERF2P84101 59 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 CD300CQ08708 224 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 FAM210BQ96KR6 192 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
VARS-219ENST00000461328 PGPA6NDG6 321 aa10.9□□□□□ -0.66
VARS-219ENST00000461328 SMLR1H3BR10 107 aa10.9□□□□□ -0.66
VARS-219ENST00000461328 CRISP2P16562 243 aa10.9□□□□□ -0.66
VARS-219ENST00000461328 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
VARS-219ENST00000461328 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
VARS-219ENST00000461328 ACTR3CQ9C0K3 210 aaPredicted RBP10.9□□□□□ -0.66
VARS-219ENST00000461328 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 RBAKDNA6NC62 111 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 CBY3A6NI87 242 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 F5H768 121 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 G3V3Q6 166 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 RGS13O14921 159 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 NMBP08949 121 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 TMEM88Q6PEY1 159 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
VARS-219ENST00000461328 ATP5G1P05496 136 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 STAG3L2P0CL84 134 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 STAG3L3P0CL85 134 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 GCHFRP30047 84 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 ATP5G3P48201 142 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 PRR9Q5T870 116 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 UBE2DNLQ8IWF7 75 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 EIF4E3Q8N5X7 224 aaKnown RBP10.88□□□□□ -0.67
VARS-219ENST00000461328 POM121L12Q8N7R1 296 aa10.88□□□□□ -0.67
VARS-219ENST00000461328 TAAR5O14804 337 aa10.87□□□□□ -0.67
VARS-219ENST00000461328 CXorf1O96002 111 aa10.87□□□□□ -0.67
VARS-219ENST00000461328 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
VARS-219ENST00000461328 ARPC5LQ9BPX5 153 aa10.87□□□□□ -0.67
VARS-219ENST00000461328 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
VARS-219ENST00000461328 GAGE7O76087 117 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GNG5P63218 68 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 TMEM167BQ9NRX6 74 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
VARS-219ENST00000461328 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
VARS-219ENST00000461328 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
VARS-219ENST00000461328 ST6GAL2Q96JF0 529 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms