RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ATP5SQ99766 215 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 SLC25A22Q9H936 323 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 NRN1Q9NPD7 142 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 SLC39A9Q9NUM3 307 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 TNFSF18Q9UNG2 199 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 HIGD1AQ9Y241 93 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 PXMP4Q9Y6I8 212 aa5.84□□□□□ -1.47
ECHDC1-212ENST00000461239 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 HELTA6NFD8 242 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 MPDU1O75352 247 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 ZNF688P0C7X2 276 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 RPL35AP18077 110 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 PAFAH1B2P68402 229 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 CD300CQ08708 224 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 LINC00305Q7Z4B0 112 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 OR8I2Q8N0Y5 310 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 OR10G8Q8NGN5 311 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 RSG1Q9BU20 258 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 AGRNO00468 2067 aa5.83□□□□□ -1.48
ECHDC1-212ENST00000461239 A0A087WZ39 114 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 FXYD6-FXYD2A0A087WZ82 144 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 KNCNA6PVL3 124 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 SNRPCP09234 159 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 GIG44P09565 113 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 NUP62P37198 522 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 CNN1P51911 297 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 AP2S1P53680 142 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 FGL1Q08830 312 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 SPATA31B1PQ5VZV4 182 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 PARD6GQ9BYG4 376 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 RETNQ9HD89 108 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 CSMD3Q7Z407 3707 aa5.82□□□□□ -1.48
ECHDC1-212ENST00000461239 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 LOC102724200A0A096LPH7 203 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 H3BQ15 152 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 COX7A2P2O60397 106 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 EIF3GO75821 320 aaKnown RBP eCLIP5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 IGLC2P0DOY2 106 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 PRB4P10163 310 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 HLA-DMBP28068 263 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 RAB31Q13636 194 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 PSMG4Q5JS54 123 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 C10orf113Q5VZT2 155 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 Q6ZRG5 221 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 FAM167A-AS1Q96KT0 104 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 C2orf48Q96LS8 159 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 SDF2L1Q9HCN8 221 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 CYTL1Q9NRR1 136 aa5.81□□□□□ -1.48
ECHDC1-212ENST00000461239 F6UB75 175 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 H3BTX0 84 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 SLC17A3O00476 420 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 RPL7P18124 248 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 CXCL2P19875 107 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 GALR1P47211 349 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 CMC4P56277 68 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 RPL7L1Q6DKI1 246 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 MIR17HGQ75NE6 70 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 RNF182Q8N6D2 247 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 GPR82Q96P67 336 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 ZNF586Q9NXT0 402 aa5.8□□□□□ -1.48
ECHDC1-212ENST00000461239 H3BMM0 161 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 ISLRO14498 428 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 ARPC5O15511 151 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 IFNA5P01569 189 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 PYYP10082 97 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 M6PRP20645 277 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 ATP6V0CP27449 155 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 PSMB3P49720 205 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 ACTL10Q5JWF8 245 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 FFAR4Q5NUL3 377 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 FAM78BQ5VT40 261 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 HSD17B11Q8NBQ5 300 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 LINC00052Q96N35 136 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 PFDN5Q99471 154 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 SH3BGRL3Q9H299 93 aa5.79□□□□□ -1.48
ECHDC1-212ENST00000461239 KIR2DL5BA0A0G2JN68 375 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 KIR2DL5BA0A0G2JPC4 375 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 A0A0J9YX75 114 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 HMSDA8MTL9 139 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 A8MTW9 85 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 C17orf112F2Z3M2 114 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 IFNA7P01567 189 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 ZNF705DP0CH99 300 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 ZNF705BP0CI00 300 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 HLA-DRB4P13762 266 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 MEOX2P50222 304 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 XGP55808 180 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 RAB2AP61019 212 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 SNRPD3P62318 126 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 BPIFA4PQ86YQ2 179 aa5.78□□□□□ -1.48
ECHDC1-212ENST00000461239 SLC7A5P1Q8MH63 180 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms