RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CD300CQ08708 224 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 BTN1A1Q13410 526 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 Q8N1X5 172 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 C12orf45Q8N5I9 185 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-216ENST00000461187 TMEM252Q8N6L7 170 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 LINC00477Q96M19 166 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 LINC00467Q9BRT7 94 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 AGPAT4-IT1Q9H0P7 198 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
SMPD4-216ENST00000461187 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
SMPD4-216ENST00000461187 PYYP10082 97 aa10.11□□□□□ -0.79
SMPD4-216ENST00000461187 HIST1H1EP10412 219 aaKnown RBP10.11□□□□□ -0.79
SMPD4-216ENST00000461187 PVALBP20472 110 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-216ENST00000461187 ANXA2RQ3ZCQ2 193 aa10.11□□□□□ -0.79
SMPD4-216ENST00000461187 NUDT15Q9NV35 164 aa10.11□□□□□ -0.79
SMPD4-216ENST00000461187 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
SMPD4-216ENST00000461187 TRGV1A0A0A0MS02 117 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 CRISP2P16562 243 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 FGF7P21781 194 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 S100A10P60903 97 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 HBG1P69891 147 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 HBG2P69892 147 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 RAB32Q13637 225 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 PDE6HQ13956 83 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 EXOC3-AS1Q8N2X6 119 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 EIF4E3Q8N5X7 224 aaKnown RBP10.1□□□□□ -0.79
SMPD4-216ENST00000461187 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 KLF12Q9Y4X4 402 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 TIMM9Q9Y5J7 89 aa10.1□□□□□ -0.79
SMPD4-216ENST00000461187 SPINK4O60575 86 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 RNASE4P34096 147 aaKnown RBP10.09□□□□□ -0.79
SMPD4-216ENST00000461187 TCL1AP56279 114 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 LINC00315P59091 139 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-216ENST00000461187 STX12Q86Y82 276 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 BLNKQ8WV28 456 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 SCRT2Q9NQ03 307 aa10.09□□□□□ -0.79
SMPD4-216ENST00000461187 MPDU1O75352 247 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 GPX1P07203 203 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 NMBP08949 121 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 H2AFB2P0C5Z0 115 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 ICAM4Q14773 271 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 ATP6V1FQ16864 119 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 PRR9Q5T870 116 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 Q6ZQT7 251 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 ZFAND2AQ8N6M9 145 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 SLC25A2Q9BXI2 301 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 NPCDR1Q9BY65 106 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
SMPD4-216ENST00000461187 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-216ENST00000461187 SIVA1O15304 175 aa10.07□□□□□ -0.8
SMPD4-216ENST00000461187 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-216ENST00000461187 IBA57Q5T440 356 aaKnown RBP10.07□□□□□ -0.8
SMPD4-216ENST00000461187 ST6GAL2Q96JF0 529 aa10.07□□□□□ -0.8
SMPD4-216ENST00000461187 FAM167A-AS1Q96KT0 104 aa10.07□□□□□ -0.8
SMPD4-216ENST00000461187 VGLL1Q99990 258 aa10.07□□□□□ -0.8
SMPD4-216ENST00000461187 AAMDCQ9H7C9 122 aa10.07□□□□□ -0.8
SMPD4-216ENST00000461187 GPN1Q9HCN4 374 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-216ENST00000461187 PAX4O43316 350 aa10.06□□□□□ -0.8
SMPD4-216ENST00000461187 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
SMPD4-216ENST00000461187 FAM122CQ6P4D5 195 aa10.06□□□□□ -0.8
SMPD4-216ENST00000461187 ZNF492Q9P255 531 aa10.06□□□□□ -0.8
SMPD4-216ENST00000461187 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
SMPD4-216ENST00000461187 IGHV1OR15-1A0A075B7D0 117 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 RGS13O14921 159 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 NXPH4O95158 308 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 IGHV3-53P01767 116 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 NHLH2Q02577 135 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 MIR17HGQ75NE6 70 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 THAP6Q8TBB0 222 aa10.05□□□□□ -0.8
SMPD4-216ENST00000461187 MRPL16Q9NX20 251 aaKnown RBP10.05□□□□□ -0.8
SMPD4-216ENST00000461187 CRYBA4P53673 196 aa10.04□□□□□ -0.8
SMPD4-216ENST00000461187 CCDC32Q9BV29 185 aa10.04□□□□□ -0.8
SMPD4-216ENST00000461187 OR51M1Q9H341 326 aa10.04□□□□□ -0.8
SMPD4-216ENST00000461187 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
SMPD4-216ENST00000461187 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 FHL2Q14192 279 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 OR5C1Q8NGR4 320 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
SMPD4-216ENST00000461187 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 OR10J4P0C629 311 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 ZNF138P52744 262 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 SLAQ13239 276 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 Q8TAT8 98 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 PHYHIPLQ96FC7 376 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 C8orf49Q96NF6 230 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 PAXXQ9BUH6 204 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
SMPD4-216ENST00000461187 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
SMPD4-216ENST00000461187 PRAF2O60831 178 aa10.01□□□□□ -0.81
SMPD4-216ENST00000461187 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms