RNA–Protein interactions for RNA: ENST00000460352.1

MMP11-205, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-205ENST00000460352 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
MMP11-205ENST00000460352 EIF4E3Q8N5X7 224 aaKnown RBP12.55□□□□□ -0.4
MMP11-205ENST00000460352 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
MMP11-205ENST00000460352 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
MMP11-205ENST00000460352 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
MMP11-205ENST00000460352 TRBV6-1A0A0K0K1D8 114 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 KNCNA6PVL3 124 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 APOC4P55056 127 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 Q8N1Y9 231 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 AGPAT4-IT1Q9H0P7 198 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
MMP11-205ENST00000460352 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
MMP11-205ENST00000460352 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 F6UB75 175 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 SRP19P09132 144 aaKnown RBP12.53□□□□□ -0.4
MMP11-205ENST00000460352 GNG4P50150 75 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 C2CD4CQ8TF44 421 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 VGLL1Q99990 258 aa12.53□□□□□ -0.4
MMP11-205ENST00000460352 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.4
MMP11-205ENST00000460352 ZNF727A8MUV8 499 aa12.52□□□□□ -0.41
MMP11-205ENST00000460352 A8MZ25 164 aa12.52□□□□□ -0.41
MMP11-205ENST00000460352 GPX1P07203 203 aa12.52□□□□□ -0.41
MMP11-205ENST00000460352 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
MMP11-205ENST00000460352 RPL35P42766 123 aaKnown RBP12.52□□□□□ -0.41
MMP11-205ENST00000460352 BAGE2Q86Y30 109 aa12.52□□□□□ -0.41
MMP11-205ENST00000460352 KIR2DL5BA0A0G2JN68 375 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 UBE2CO00762 179 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 ZNF705DP0CH99 300 aaPredicted RBP12.51□□□□□ -0.41
MMP11-205ENST00000460352 ZNF705BP0CI00 300 aaPredicted RBP12.51□□□□□ -0.41
MMP11-205ENST00000460352 CDKN1BP46527 198 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 ERCC8Q13216 396 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 GDF5OSQ5U4N7 250 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
MMP11-205ENST00000460352 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 CSTL1Q9H114 145 aa12.51□□□□□ -0.41
MMP11-205ENST00000460352 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
MMP11-205ENST00000460352 IGHV4-30-4P0DP06 118 aa12.5□□□□□ -0.41
MMP11-205ENST00000460352 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
MMP11-205ENST00000460352 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
MMP11-205ENST00000460352 PARLQ9H300 379 aa12.5□□□□□ -0.41
MMP11-205ENST00000460352 TRAV8-1A0A0A6YYK1 113 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 A8MTW9 85 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 C9JCJ5 164 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 LTAP01374 205 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 RPL35AP18077 110 aaKnown RBP12.49□□□□□ -0.41
MMP11-205ENST00000460352 ZNF124Q15973 351 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 DEFB121Q5J5C9 76 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 LINC00479Q96M42 142 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 ASCL2Q99929 193 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
MMP11-205ENST00000460352 CRISP2P16562 243 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 DEFB1P60022 68 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 Q86TA4 180 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 TMEM183AQ8IXX5 376 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
MMP11-205ENST00000460352 IGLV2-11P01706 119 aa12.47□□□□□ -0.41
MMP11-205ENST00000460352 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
MMP11-205ENST00000460352 CENPWQ5EE01 88 aa12.47□□□□□ -0.41
MMP11-205ENST00000460352 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
MMP11-205ENST00000460352 CITED4Q96RK1 184 aa12.47□□□□□ -0.41
MMP11-205ENST00000460352 AURKAIP1Q9NWT8 199 aaPredicted RBP12.47□□□□□ -0.41
MMP11-205ENST00000460352 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
MMP11-205ENST00000460352 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 F8W036 122 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 INSP01308 110 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 Q8TAT8 98 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
MMP11-205ENST00000460352 TRAV21A0A0B4J279 112 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 KRBOX1C9JBD0 128 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
MMP11-205ENST00000460352 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
MMP11-205ENST00000460352 RNASE4P34096 147 aaKnown RBP12.45□□□□□ -0.42
MMP11-205ENST00000460352 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 TMEM208Q9BTX3 173 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 MGAM2Q2M2H8 2515 aa12.45□□□□□ -0.42
MMP11-205ENST00000460352 AGRNO00468 2067 aa12.44□□□□□ -0.42
MMP11-205ENST00000460352 C7orf71A4D174 169 aa12.44□□□□□ -0.42
MMP11-205ENST00000460352 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
MMP11-205ENST00000460352 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms