RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 GPX1P07203 203 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 RXFP4Q8TDU9 374 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 LYRM9A8MSI8 78 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 ARPC5O15511 151 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 RPL7L1Q6DKI1 246 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 APLNQ9ULZ1 77 aa12.9□□□□□ -0.34
PDLIM2-215ENST00000456545 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 PGPA6NDG6 321 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 VGLL1Q99990 258 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 NDUFAF3Q9BU61 184 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 ACTR3CQ9C0K3 210 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 RYR3Q15413 4870 aa12.89□□□□□ -0.35
PDLIM2-215ENST00000456545 C7orf71A4D174 169 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 TAAR5O14804 337 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 ZNF138P52744 262 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 TMEM263Q8WUH6 116 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
PDLIM2-215ENST00000456545 DYNC2H1Q8NCM8 4307 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-215ENST00000456545 SNURFLB1AK76 121 aa12.87□□□□□ -0.35
PDLIM2-215ENST00000456545 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
PDLIM2-215ENST00000456545 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
PDLIM2-215ENST00000456545 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-215ENST00000456545 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
PDLIM2-215ENST00000456545 NMBP08949 121 aa12.86□□□□□ -0.35
PDLIM2-215ENST00000456545 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
PDLIM2-215ENST00000456545 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
PDLIM2-215ENST00000456545 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 CXorf1O96002 111 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 CRISP2P16562 243 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 CD300CQ08708 224 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 BTN1A1Q13410 526 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 FAM210BQ96KR6 192 aa12.85□□□□□ -0.35
PDLIM2-215ENST00000456545 CBY3A6NI87 242 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 KLLNB2CW77 178 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 RGS13O14921 159 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 GCHFRP30047 84 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 Q8TAT8 98 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
PDLIM2-215ENST00000456545 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.36
PDLIM2-215ENST00000456545 G3V3Q6 166 aa12.83□□□□□ -0.36
PDLIM2-215ENST00000456545 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-215ENST00000456545 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
PDLIM2-215ENST00000456545 RYR2Q92736 4967 aa12.83□□□□□ -0.36
PDLIM2-215ENST00000456545 TRBV7-9A0A0J9YWB2 115 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 F5H768 121 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 ATP5G1P05496 136 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 ATP5G3P48201 142 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 ARPC5LQ9BPX5 153 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 SACSQ9NZJ4 4579 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 LYSTQ99698 3801 aa12.82□□□□□ -0.36
PDLIM2-215ENST00000456545 K7EQM0 130 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 P0DMU3 169 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 ZFAND2AQ8N6M9 145 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 ST6GAL2Q96JF0 529 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
PDLIM2-215ENST00000456545 A0A0D9SG52 128 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 CTXND1A0A1B0GTU2 59 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 KANTRA0A1W2PQU2 76 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 GAGE7O76087 117 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 KCNRGQ8N5I3 272 aa12.8□□□□□ -0.36
PDLIM2-215ENST00000456545 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 HMSDA8MTL9 139 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 SUMO1P63165 101 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 GNG5P63218 68 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 ZNF345Q14585 488 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 PRR9Q5T870 116 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 TMEM88Q6PEY1 159 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms