RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 Q5BKY6 102 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TOR2AQ5JU69 321 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MIC13Q5XKP0 118 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF546Q86UE3 836 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 EXOC3-AS1Q8N2X6 119 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF431Q8TF32 576 aaPredicted RBP4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 DEDD2Q8WXF8 326 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TMEM37Q8WXS4 190 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SCGB3A2Q96PL1 93 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SDHCQ99643 169 aaPredicted RBP4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LINC00467Q9BRT7 94 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SRRQ9GZT4 340 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MGAT4CQ9UBM8 478 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ICOSQ9Y6W8 199 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LOC100131303A0A0U1RQF7 123 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C9orf170A2RU37 121 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 E5RGE8 158 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 J3QL48 77 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 GOSR2O14653 212 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SCO1O75880 301 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C1QBP02746 253 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 OR4E1P0C645 316 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CXCL2P19875 107 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FAUP35544 74 aaKnown RBP4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LEPP41159 167 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PLP1P60201 277 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SELENOTP62341 195 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 DAZ2Q13117 558 aaKnown RBP4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ASAH1Q13510 395 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 BAK1Q16611 211 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 GCSAMLQ5JQS6 135 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MUC21Q5SSG8 566 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C10orf113Q5VZT2 155 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CDPF1Q6NVV7 123 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MZT2BQ6NZ67 158 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TMEM14EPQ6UXP3 125 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 BPIFA4PQ86YQ2 179 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TCTE3Q8IZS6 198 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 Q8N3U1 123 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TOMM5Q8N4H5 51 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 BLNKQ8WV28 456 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 Q9HAA7 133 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FAM30AQ9NZY2 134 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 GSKIPQ9P0R6 139 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 HSPB11Q9Y547 144 aa4.05□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 KLLNB2CW77 178 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 H3BNG1 76 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 K7EPK0 472 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 EREGO14944 169 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LECT2O14960 151 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SPINK4O60575 86 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PRAF2O60831 178 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 EIF3GO75821 320 aaKnown RBP eCLIP4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CST7O76096 145 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 NDUFB4O95168 129 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IFNA5P01569 189 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MBPP02686 304 aaPredicted RBP4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 GCSHP23434 173 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TCL1AP56279 114 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ID3Q02535 119 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 WFDC2Q14508 124 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IAH1Q2TAA2 248 aaPredicted RBP4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LINC01620Q4KN68 170 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FAM122CQ6P4D5 195 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZFAND2AQ8N6M9 145 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SAT2Q96F10 170 aaPredicted RBP4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LINC00477Q96M19 166 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 VGLL1Q99990 258 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C20orf144Q9BQM9 153 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LSM5Q9Y4Y9 91 aaKnown RBP4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LY96Q9Y6Y9 160 aa4.04□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TNXBP22105 4242 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TRBV19A0A075B6N1 114 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FAM240BA0A1B0GVZ2 78 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C7orf66A4D0T2 115 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FAM25EA8MYX2 175 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF324O75467 553 aaPredicted RBP4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CRYGDP07320 174 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 GYPEP15421 78 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 S100A7P31151 101 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 BTCP35070 178 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CAMLGP49069 296 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CAV2P51636 162 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CRYBA4P53673 196 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 AP3S2P59780 193 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FHL2Q14192 279 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LYPD5Q6UWN5 251 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SLC51BQ86UW2 128 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 EIF4E3Q8N5X7 224 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms