RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 PRNTQ86SH4 94 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 FMC1Q96HJ9 113 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 PRR25Q96S07 402 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 FLI1Q01543 452 aaPredicted RBP10.85□□□□□ -0.67
TNF-208ENST00000449264 TMEM183BQ1AE95 376 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 Q86TA4 180 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 PSG8Q9UQ74 426 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 F8W036 122 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 CMC4P56277 68 aaPredicted RBP10.85□□□□□ -0.67
TNF-208ENST00000449264 KRTAP10-11P60412 298 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 SAMD5Q5TGI4 173 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 NHLRC2Q8NBF2 726 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 C19orf73Q9NVV2 129 aa10.85□□□□□ -0.67
TNF-208ENST00000449264 TRBV20OR9-2A0A075B6H5 130 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 HLA-DRB4P13762 266 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 GNG4P50150 75 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 HLA-DRB4X5D2U9 266 aa10.84□□□□□ -0.67
TNF-208ENST00000449264 S100A9P06702 114 aaKnown RBP10.83□□□□□ -0.68
TNF-208ENST00000449264 ZNF138P52744 262 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 EGFEM1PQ0D2K5 195 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 STHQ8IWL8 128 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 DEFB125Q8N687 156 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 PPP1R14DQ9NXH3 145 aa10.83□□□□□ -0.68
TNF-208ENST00000449264 J3KRW8 73 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 DUSP14O95147 198 aaKnown RBP10.82□□□□□ -0.68
TNF-208ENST00000449264 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 TAS2R60P59551 318 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
TNF-208ENST00000449264 ZNF492Q9P255 531 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
TNF-208ENST00000449264 H3BMM0 161 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 LTAP01374 205 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 FAM74A3Q4VXF1 159 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 C8orf49Q96NF6 230 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
TNF-208ENST00000449264 ZMAT5Q9UDW3 170 aaKnown RBP10.82□□□□□ -0.68
TNF-208ENST00000449264 C9JCJ5 164 aa10.81□□□□□ -0.68
TNF-208ENST00000449264 MGST1P10620 155 aaKnown RBP10.81□□□□□ -0.68
TNF-208ENST00000449264 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
TNF-208ENST00000449264 SEC11CQ9BY50 192 aa10.81□□□□□ -0.68
TNF-208ENST00000449264 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
TNF-208ENST00000449264 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
TNF-208ENST00000449264 ATP6V1G1O75348 118 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
TNF-208ENST00000449264 FXYD7P58549 80 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 NAT8Q9UHE5 227 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 DNAH3Q8TD57 4116 aa10.8□□□□□ -0.68
TNF-208ENST00000449264 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
TNF-208ENST00000449264 ADIRFQ15847 76 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 PRR27Q6MZM9 219 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 Q8N1Y9 231 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 M0R2Z0 102 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 IGLV2-8P01709 118 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
TNF-208ENST00000449264 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 OCC1Q8TAD7 63 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 ZC2HC1AQ96GY0 325 aa10.79□□□□□ -0.68
TNF-208ENST00000449264 APOC3P02656 99 aa10.78□□□□□ -0.68
TNF-208ENST00000449264 LEPP41159 167 aa10.78□□□□□ -0.68
TNF-208ENST00000449264 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
TNF-208ENST00000449264 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
TNF-208ENST00000449264 AMTNQ6UX39 209 aa10.78□□□□□ -0.68
TNF-208ENST00000449264 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
TNF-208ENST00000449264 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 K7EN84 100 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 GCGP01275 180 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
TNF-208ENST00000449264 GPX1P07203 203 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 OR5I1Q13606 314 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 SMUG1Q53HV7 270 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 PRR9Q5T870 116 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 FAM19A4Q96LR4 140 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
TNF-208ENST00000449264 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms